YHP1
YDR451C
One of two homeobox transcriptional repressors (see also Yox1p), that bind to Mcm1p and to early cell cycle box (ECB) elements of cell cycle regulated genes, thereby restricting ECB-mediated transcription to the M/G1 interval
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.012 0.964 0.964 0.012 0.012 0.012 C | 0.012 0.012 0.012 0.012 0.012 0.012 G | 0.012 0.012 0.012 0.012 0.012 0.964 T | 0.964 0.012 0.012 0.964 0.964 0.012
A | 1 96 96 1 1 1 C | 1 1 1 1 1 1 G | 1 1 1 1 1 96 T | 96 1 1 96 96 1
A | -3.28 1.10 1.10 -3.28 -3.28 -3.28 C | -2.71 -2.71 -2.71 -2.71 -2.71 -2.71 G | -2.71 -2.71 -2.71 -2.71 -2.71 1.68 T | 1.10 -3.28 -3.28 1.10 1.10 -3.28
Alternative candidate matrices 3
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
YHP1Foat et. al.P = 0.006965View matrix ↘
A | 0.58 0.01 0.01 0.05 0.01 0.01 0.18 0.97 0.01 0.11 0.01 0.32 0.97 C | 0.03 0.92 0.74 0.01 0.01 0.02 0.55 0.01 0.01 0.87 0.01 0.26 0.01 G | 0.01 0.01 0.25 0.01 0.01 0.96 0.26 0.01 0.03 0.01 0.43 0.34 0.01 T | 0.39 0.05 0.01 0.94 0.97 0.01 0.01 0.01 0.95 0.01 0.56 0.08 0.01
A | 57 1 1 5 1 1 18 97 1 11 1 32 97 C | 3 92 74 1 1 2 55 1 1 87 1 26 1 G | 1 1 25 1 1 96 26 1 3 1 43 34 1 T | 39 5 1 94 97 1 1 1 95 1 56 8 1
A | 0.59 -3.47 -3.47 -1.86 -3.47 -3.47 -0.58 1.11 -3.47 -1.07 -3.47 0.00 1.11 C | -1.79 1.63 1.41 -2.89 -2.89 -2.20 1.12 -2.89 -2.89 1.58 -2.89 0.37 -2.89 G | -2.89 -2.89 0.33 -2.89 -2.89 1.67 0.37 -2.89 -1.79 -2.89 0.87 0.64 -2.89 T | 0.20 -1.86 -3.47 1.08 1.11 -3.47 -3.47 -3.47 1.09 -3.47 0.56 -1.39 -3.47
YHP1Harbison et. al.P = 0.06083View matrix ↘
A | 0.012 0.964 0.964 0.012 0.012 0.012 C | 0.012 0.012 0.012 0.012 0.012 0.012 G | 0.012 0.012 0.012 0.012 0.012 0.965 T | 0.964 0.012 0.012 0.964 0.964 0.012
A | 1 96 96 1 1 1 C | 1 1 1 1 1 1 G | 1 1 1 1 1 96 T | 96 1 1 96 96 1
A | -3.28 1.10 1.10 -3.28 -3.28 -3.28 C | -2.71 -2.71 -2.71 -2.71 -2.71 -2.71 G | -2.71 -2.71 -2.71 -2.71 -2.71 1.68 T | 1.10 -3.28 -3.28 1.10 1.10 -3.28
YHP1Morozov et. al.P = 1View matrix ↘
A | 0.720 0.058 0.255 0.214 0.063 0.136 0.112 0.185 0.278 0.225 0.604 0.273 0.154 0.190 0.583 0.570 0.768 0.220 0.343 0.506 0.616 0.048 0.687 C | 0.054 0.051 0.217 0.315 0.663 0.370 0.209 0.388 0.186 0.207 0.220 0.440 0.217 0.167 0.131 0.279 0.068 0.224 0.327 0.019 0.048 0.823 0.134 G | 0.170 0.241 0.058 0.214 0.095 0.421 0.151 0.174 0.349 0.102 0.106 0.067 0.572 0.432 0.091 0.083 0.099 0.062 0.080 0.040 0.227 0.074 0.113 T | 0.055 0.650 0.471 0.257 0.179 0.074 0.528 0.254 0.187 0.466 0.070 0.219 0.058 0.211 0.195 0.068 0.065 0.493 0.249 0.436 0.109 0.056 0.067
A | 72 5 25 21 6 13 11 18 27 22 60 27 15 19 58 56 76 22 34 50 61 4 68 C | 5 5 21 31 66 37 20 38 18 20 22 44 21 16 13 27 6 22 32 1 4 82 13 G | 17 24 5 21 9 42 15 17 34 10 10 6 57 43 9 8 9 6 8 4 22 7 11 T | 5 65 47 25 17 7 52 25 18 46 7 21 5 21 19 6 6 49 24 43 10 5 6
A | 0.81 -1.71 -0.23 -0.40 -1.63 -0.86 -1.05 -0.55 -0.14 -0.35 0.64 -0.16 -0.73 -0.52 0.60 0.58 0.88 -0.37 0.07 0.46 0.65 -1.90 0.76 C | -1.20 -1.26 0.19 0.56 1.30 0.72 0.15 0.77 0.03 0.14 0.20 0.89 0.19 -0.07 -0.32 0.44 -0.97 0.22 0.60 -2.25 -1.32 1.52 -0.30 G | -0.06 0.29 -1.13 0.17 -0.64 0.85 -0.18 -0.03 0.66 -0.57 -0.53 -0.99 1.16 0.88 -0.68 -0.77 -0.60 -1.07 -0.81 -1.50 0.23 -0.89 -0.47 T | -1.76 0.71 0.39 -0.22 -0.58 -1.46 0.50 -0.23 -0.54 0.38 -1.52 -0.38 -1.71 -0.42 -0.50 -1.55 -1.59 0.43 -0.25 0.31 -1.08 -1.74 -1.56
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 92 genes
YAR009C, YAR018C, YBR174C, YBR176W, YBR248C, YBR292C, YCR028C, YDL017W, YDL018C, YDL064W, YDL065C, YDL092W, YDL094C, YDL146W, YDR028C, YDR029W, YDR080W, YDR117C, YDR118W, YDR127W, YDR136C, YDR138W, YDR190C, YDR191W, YDR210W-D, YDR273W, YDR279W, YEL032W, YER013W, YER133W, YER135C, YER138C, YFR023W, YGL137W, YGL138C, YGL159W, YGR004W, YGR056W, YGR092W, YGR150C, YHR001W, YHR028C, YHR062C, YIL048W, YIL075C, YJL037W, YJL038C, YJL145W, YJR010C-A, YKL161C, YKL177W, YKL179C, YLL016W, YLR011W, YLR020C, YLR021W, YLR085C, YLR086W, YLR222C, YLR275W, YLR311C, YLR312C, YLR312W-A, YLR330W, YMR106C, YMR197C, YMR198W, YMR257C, YMR270C, YMR283C, YNL131W, YNL187W, YNL210W, YNL211C, YNR006W, YNR067C, YOL115W, YOR004W, YOR059C, YOR102W, YOR148C, YOR188W, YOR214C, YOR297C, YOR298W, YOR353C, YPL159C, YPL208W, YPL209C, YPR047W, YPR092W, YPR118W
Genes affected by TF deletion 62 genes
YBR006W, YDR222W, YPL015C, YOR381W, YDR034C-A, YDR365W-B, YDR399W, YML113W, YPL014W, YPL016W, YLR374C, YMR103C, YGR250C, YLR120C, YNL303W, YNL305C, YJL017W, YMR104C, YDR340W, YLR121C, YCR021C, YDR074W, YOR267C, YPL247C, YKL051W, YLR251W, YML120C, YMR023C, YOR384W, YPR150W, YFR017C, YMR084W, YMR145C, YGR008C, YIR035C, YLR375W, YOL083W, YER064C, YNR034W, YPL087W, YOR273C, YGR138C, YLR414C, YOR019W, YNL033W, YGR139W, YOL158C, YNL160W, YBR054W, YLR297W, YEL067C, YLR428C, YDR055W, YMR034C, YBR214W, YMR181C, YMR250W, YOR092W, YGR057C, YCL040W, YHR110W, YNR019W