Computational genomics / Research archive · 2012
The DNA-binding atlas of Saccharomyces transcription factors.
Search experimentally benchmarked position weight matrices, explore curated transcription factors, and revisit the scientific data behind ScerTF.
196transcription factors
1,224curated matrices in this archive
11literature data sources
QUERY THE DATABASE
Find a transcription factor or binding motif.
THE RESEARCH
A single recommended matrix for each factor.
The original project assembled DNA-binding models from eleven published sources, evaluated their ability to predict in-vivo TF occupancy and deletion effects, and selected a best-performing matrix for each curated yeast transcription factor.
Explore methods and benchmarks →EXPLORE THE ARCHIVE
Browse all 196 transcription factors
Open individual records to see sequence logos, source references, alternative matrices, gene annotations, and interaction plots.
Browse the collection