← All factors / TF RECORD
YGR067C
No recorded aliases
Function unknown
01 / RECOMMENDED MATRIX
Best-performing DNA-binding model.
Fisher’s P-value0.0004672
Information content7.273
Max PWM score8.15
Recommended cutoff4.68
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.091 0.227 0.057 0.089 0.120 0.152 C | 0.055 0.339 0.049 0.051 0.023 0.051 G | 0.784 0.055 0.858 0.859 0.829 0.732 T | 0.070 0.378 0.036 0.001 0.028 0.064
Position count matrix (PCM)
A | 9 22 5 8 12 15 C | 5 33 4 5 2 5 G | 78 5 85 85 82 73 T | 7 37 3 0 2 6
Position weight matrix (PWM)
A | -1.26 -0.34 -1.73 -1.28 -0.98 -0.74 C | -1.19 0.63 -1.30 -1.26 -2.06 -1.26 G | 1.47 -1.19 1.56 1.56 1.53 1.40 T | -1.52 0.17 -2.18 -5.77 -2.44 -1.61
02 / COMPARATIVE BENCHMARKS
Alternative candidate matrices 3
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
YGR067CBadis et. al.P = 0.1719View matrix ↘
Fisher’s P-value0.1719
Information content11.75
Max PWM score11.49
Recommended cutoff10
Position frequency matrix (PFM)
A | 0.01 0.01 0.01 0.01 0.41 0.01 0.27 0.23 0.24 0.25 0.25 0.22 0.26 C | 0.97 0.97 0.97 0.97 0.01 0.97 0.26 0.26 0.26 0.24 0.22 0.26 0.24 G | 0.01 0.01 0.01 0.01 0.31 0.01 0.17 0.20 0.20 0.25 0.26 0.26 0.26 T | 0.01 0.01 0.01 0.01 0.28 0.01 0.31 0.31 0.30 0.26 0.27 0.26 0.25
Position count matrix (PCM)
A | 1 1 1 1 41 1 27 23 24 25 25 22 26 C | 97 97 97 97 1 97 26 26 26 24 22 26 24 G | 1 1 1 1 31 1 17 20 20 25 26 26 26 T | 1 1 1 1 28 1 31 31 30 26 27 26 25
Position weight matrix (PWM)
A | -3.47 -3.47 -3.47 -3.47 0.25 -3.47 -0.17 -0.33 -0.29 -0.25 -0.25 -0.37 -0.21 C | 1.68 1.68 1.68 1.68 -2.89 1.68 0.37 0.37 0.37 0.29 0.20 0.37 0.29 G | -2.89 -2.89 -2.89 -2.89 0.54 -2.89 -0.06 0.11 0.11 0.33 0.37 0.37 0.37 T | -3.47 -3.47 -3.47 -3.47 -0.13 -3.47 -0.03 -0.03 -0.06 -0.21 -0.17 -0.21 -0.25
YGR067CFoat et. al.P = 1View matrix ↘
Fisher’s P-value1
Information content22.55
Max PWM score25.26
Recommended cutoff18.95
Position frequency matrix (PFM)
A | 0.37 0.01 0.84 0.01 0.94 0.97 0.31 0.04 0.33 0.63 0.02 0.43 0.03 0.12 0.27 0.46 0.21 0.05 0.26 0.01 0.01 0.03 0.01 0.23 C | 0.35 0.72 0.01 0.97 0.04 0.01 0.60 0.61 0.61 0.01 0.45 0.04 0.05 0.29 0.28 0.21 0.01 0.33 0.46 0.35 0.96 0.01 0.01 0.58 G | 0.01 0.07 0.11 0.01 0.01 0.01 0.07 0.13 0.04 0.34 0.06 0.49 0.73 0.25 0.42 0.06 0.61 0.06 0.15 0.14 0.02 0.01 0.97 0.15 T | 0.28 0.20 0.05 0.01 0.01 0.01 0.02 0.22 0.01 0.02 0.48 0.05 0.19 0.34 0.03 0.27 0.18 0.55 0.13 0.50 0.01 0.95 0.01 0.04
Position count matrix (PCM)
A | 37 1 84 1 94 97 31 4 33 63 2 43 3 12 27 46 21 5 26 1 1 3 1 23 C | 35 72 1 97 4 1 60 61 61 1 45 4 5 28 28 21 1 33 46 35 96 1 1 57 G | 1 7 11 1 1 1 7 13 4 34 6 49 73 25 42 6 61 6 15 14 2 1 97 15 T | 28 20 5 1 1 1 2 22 1 2 48 5 19 34 3 27 18 55 13 50 1 95 1 4
Position weight matrix (PWM)
A | 0.15 -3.47 0.97 -3.47 1.08 1.11 -0.03 -2.08 0.03 0.68 -2.77 0.30 -2.37 -0.98 -0.17 0.36 -0.42 -1.86 -0.21 -3.47 -3.47 -2.37 -3.47 -0.33 C | 0.66 1.39 -2.89 1.68 -1.50 -2.89 1.20 1.22 1.22 -2.89 0.92 -1.50 -1.28 0.48 0.44 0.15 -2.89 0.61 0.94 0.66 1.67 -2.89 -2.89 1.17 G | -2.89 -0.94 -0.49 -2.89 -2.89 -2.89 -0.94 -0.33 -1.50 0.64 -1.10 1.00 1.40 0.33 0.85 -1.10 1.22 -1.10 -0.18 -0.25 -2.20 -2.89 1.68 -0.18 T | -0.13 -0.47 -1.86 -3.47 -3.47 -3.47 -2.77 -0.37 -3.47 -2.77 0.41 -1.86 -0.52 0.06 -2.37 -0.17 -0.58 0.54 -0.90 0.45 -3.47 1.09 -3.47 -2.08
YGR067CZhu et. al.P = 1View matrix ↘
Fisher’s P-value1
Information content16.62
Max PWM score18.17
Recommended cutoff13.63
Position frequency matrix (PFM)
A | 0.13 0.67 0.19 0.10 0.01 0.14 0.01 0.01 0.01 0.01 0.06 0.83 0.29 0.19 0.24 0.18 0.69 C | 0.33 0.07 0.25 0.22 0.01 0.74 0.01 0.01 0.01 0.01 0.09 0.02 0.44 0.15 0.11 0.31 0.05 G | 0.49 0.18 0.45 0.17 0.97 0.02 0.97 0.97 0.97 0.97 0.11 0.07 0.16 0.21 0.43 0.17 0.15 T | 0.06 0.08 0.11 0.51 0.01 0.11 0.01 0.01 0.01 0.01 0.75 0.09 0.11 0.46 0.21 0.34 0.11
Position count matrix (PCM)
A | 13 67 19 10 1 14 1 1 1 1 6 83 28 19 24 18 69 C | 33 7 25 22 1 74 1 1 1 1 9 2 44 15 11 31 5 G | 49 18 45 17 97 2 97 97 97 97 11 7 16 21 43 17 15 T | 6 8 11 51 1 11 1 1 1 1 75 9 11 46 21 34 11
Position weight matrix (PWM)
A | -0.90 0.74 -0.52 -1.16 -3.47 -0.83 -3.47 -3.47 -3.47 -3.47 -1.67 0.95 -0.10 -0.52 -0.29 -0.58 0.77 C | 0.61 -0.94 0.33 0.20 -2.89 1.41 -2.89 -2.89 -2.89 -2.89 -0.69 -2.20 0.89 -0.18 -0.49 0.54 -1.28 G | 1.00 0.00 0.92 -0.06 1.68 -2.20 1.68 1.68 1.68 1.68 -0.49 -0.94 -0.12 0.15 0.87 -0.06 -0.18 T | -1.67 -1.39 -1.07 0.47 -3.47 -1.07 -3.47 -3.47 -3.47 -3.47 0.85 -1.27 -1.07 0.36 -0.42 0.06 -1.07
03 / EXPERIMENTAL CONTEXT
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 27 genes
YBR276C, YBR278W, YDR026C, YGR042W, YGR182C, YHL047C, YHR118C, YHR119W, YJL014W, YJL016W, YJR030C, YJR140C, YJR141W, YKL047W, YKL048C, YKL197C, YLR125W, YLR293C, YLR319C, YLR320W, YMR004W, YOL136C, YOL137W, YOL138C, YPL001W, YPL002C, YPR019W
Genes affected by TF deletion 66 genes
YGL205W, YHR146W, YJL115W, YKL043W, YLR404W, YBR005W, YGL166W, YOL016C, YOR220W, YBR126C, YHR053C, YOR317W, YMR314W, YMR316C-A, YMR316W, YNL305C, YBR093C, YFR004W, YDL219W, YDR281C, YKL142W, YKL206C, YIL124W, YOR385W, YOR230W, YFR041C, YLR099C, YOR357C, YLR194C, YNR035C, YBR071W, YBR101C, YFL016C, YOR298C-A, YNL310C, YNL312W, YKR024C, YNL065W, YAR028W, YDR210W, YGR136W, YNL289W, YNL098C, YAR027W, YDR209C, YEL060C, YER014W, YGR137W, YOR052C, YPL004C, YJL038C, YKL001C, YOR367W, YHR219W, YBR056W, YOR027W, YMR068W, YBR244W, YKL065C, YLR079W, YDL023C, YCL040W, YDL022W, YGR026W, YOL101C, YNL007C