WAR1
YML076C
Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.01 0.01 0.24 0.96 0.09 0.12 0.41 0.12 0.34 0.53 0.04 0.18 C | 0.07 0.05 0.02 0.01 0.68 0.01 0.01 0.01 0.12 0.36 0.80 0.68 G | 0.05 0.11 0.72 0.02 0.01 0.15 0.08 0.86 0.29 0.09 0.01 0.11 T | 0.88 0.83 0.01 0.01 0.23 0.72 0.51 0.01 0.25 0.03 0.16 0.04
A | 1 1 24 96 9 12 41 12 34 53 4 18 C | 7 5 2 1 68 1 1 1 12 36 80 68 G | 5 11 72 2 1 15 8 86 28 9 1 11 T | 88 83 1 1 23 72 51 1 25 3 16 4
A | -3.47 -3.47 -0.29 1.10 -1.27 -0.98 0.25 -0.98 0.06 0.50 -2.08 -0.58 C | -0.94 -1.28 -2.20 -2.89 1.33 -2.89 -2.89 -2.89 -0.41 0.69 1.49 1.33 G | -1.28 -0.49 1.39 -2.20 -2.89 -0.18 -0.81 1.56 0.48 -0.69 -2.89 -0.49 T | 1.01 0.95 -3.47 -3.47 -0.33 0.81 0.47 -3.47 -0.25 -2.37 -0.69 -2.08
Alternative candidate matrices 1
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
WAR1Morozov et. al.P = 1View matrix ↘
A | 0.067 0.066 0.060 0.114 0.123 0.180 0.279 0.262 0.744 0.132 0.186 0.637 0.200 0.270 0.325 0.209 0.118 0.102 0.677 0.360 0.399 0.595 0.430 0.156 0.561 0.376 0.048 0.332 0.127 C | 0.711 0.601 0.303 0.289 0.724 0.159 0.110 0.206 0.073 0.184 0.645 0.075 0.421 0.225 0.099 0.428 0.193 0.342 0.127 0.181 0.289 0.137 0.288 0.414 0.224 0.333 0.787 0.064 0.143 G | 0.015 0.200 0.434 0.282 0.064 0.135 0.152 0.392 0.063 0.218 0.069 0.133 0.143 0.218 0.325 0.222 0.190 0.503 0.107 0.156 0.247 0.142 0.113 0.136 0.114 0.085 0.088 0.320 0.582 T | 0.208 0.133 0.203 0.314 0.089 0.526 0.459 0.140 0.120 0.466 0.101 0.155 0.235 0.287 0.251 0.140 0.499 0.053 0.089 0.303 0.064 0.126 0.170 0.294 0.101 0.206 0.077 0.284 0.148
A | 6 6 6 11 12 18 27 26 74 13 18 63 20 27 32 20 11 10 67 36 39 59 43 15 56 37 4 33 12 C | 71 60 30 28 72 15 11 20 7 18 64 7 42 22 9 42 19 34 12 18 28 13 28 41 22 33 78 6 14 G | 1 20 43 28 6 13 15 39 6 21 6 13 14 21 32 22 19 50 10 15 24 14 11 13 11 8 8 32 58 T | 20 13 20 31 8 52 45 14 12 46 10 15 23 28 25 14 49 5 8 30 6 12 17 29 10 20 7 28 14
A | -1.56 -1.58 -1.67 -1.03 -0.96 -0.58 -0.14 -0.20 0.84 -0.89 -0.54 0.69 -0.47 -0.17 0.02 -0.43 -1.00 -1.14 0.75 0.12 0.22 0.62 0.30 -0.72 0.56 0.16 -1.90 0.04 -0.92 C | 1.37 1.21 0.52 0.47 1.39 -0.12 -0.49 0.13 -0.90 0.02 1.28 -0.88 0.85 0.22 -0.60 0.87 0.07 0.64 -0.35 0.01 0.47 -0.27 0.47 0.83 0.22 0.62 1.48 -1.03 -0.23 G | -2.48 0.11 0.88 0.45 -1.03 -0.29 -0.17 0.78 -1.05 0.19 -0.96 -0.30 -0.23 0.19 0.59 0.21 0.05 1.03 -0.52 -0.14 0.32 -0.24 -0.47 -0.28 -0.46 -0.75 -0.72 0.58 1.17 T | -0.43 -0.88 -0.46 -0.02 -1.28 0.50 0.36 -0.83 -0.98 0.38 -1.15 -0.72 -0.31 -0.11 -0.24 -0.83 0.44 -1.80 -1.28 -0.05 -1.61 -0.93 -0.63 -0.08 -1.15 -0.44 -1.42 -0.12 -0.77
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 115 genes
YAL048C, YAR007C, YAR008W, YAR050W, YBL050W, YBL051C, YBL074C, YBL101W-B, YBR060C, YBR062C, YBR064W, YBR120C, YBR154C, YBR155W, YBR236C, YBR237W, YBR254C, YBR255W, YBR258C, YBR259W, YBR293W, YCR017C, YCR082W, YCR099C, YCR100C, YDL001W, YDL002C, YDL045W-A, YDL137W, YDL156W, YDL157C, YDL158C, YDR074W, YDR089W, YDR090C, YDR194C, YDR195W, YDR318W, YDR333C, YDR334W, YDR344C, YDR355C, YDR440W, YDR461W, YEL055C, YGL095C, YGL144C, YGL169W, YGL195W, YGR084C, YGR094W, YGR215W, YGR220C, YHL002W, YHL003C, YHR005C-A, YHR022C, YHR023W, YHR068W, YHR086W, YHR118C, YHR119W, YHR155W, YIL084C, YIL115C, YIR024C, YIR025W, YIR030C, YJL012C, YJR067C, YJR068W, YKL123W, YKL124W, YKL201C, YKR059W, YLR087C, YLR088W, YLR242C, YLR243W, YLR282C, YLR450W, YML096W, YML097C, YML124C, YMR066W, YMR154C, YMR155W, YMR188C, YMR189W, YMR271C, YMR287C, YMR288W, YMR290W-A, YNL010W, YNL011C, YNL025C, YNL222W, YNL290W, YNL291C, YOL097C, YOR035C, YOR036W, YOR174W, YOR188W, YOR215C, YOR343C-A, YOR343C-B, YPL180W, YPL182C, YPL243W, YPL244C, YPL257W-A, YPL257W-B, YPR110C, YPR111W
Genes affected by TF deletion 17 genes
YOR071C, YKR011C, YNL117W, YBR093C, YFR006W, YHL020C, YDR200C, YMR017W, YKL050C, YMR169C, YOR072W, YPR123C, YLR297W, YMR034C, YML076C, YDL057W, YFR029W