← All factors / TF RECORD
TBS1
YBR150C
Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
01 / RECOMMENDED MATRIX
Best-performing DNA-binding model.
Fisher’s P-value1.02e-08
Information content16.79
Max PWM score14.49
Recommended cutoff9.59
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.14 0.01 0.01 0.01 0.90 0.03 0.01 0.01 0.02 0.04 C | 0.23 0.96 0.01 0.01 0.04 0.03 0.97 0.97 0.01 0.63 G | 0.55 0.01 0.97 0.97 0.03 0.04 0.01 0.01 0.96 0.09 T | 0.07 0.02 0.01 0.01 0.03 0.90 0.01 0.01 0.01 0.25
Position count matrix (PCM)
A | 14 1 1 1 90 3 1 1 2 4 C | 23 96 1 1 4 3 97 97 1 63 G | 55 1 97 97 3 4 1 1 96 9 T | 7 2 1 1 3 90 1 1 1 25
Position weight matrix (PWM)
A | -0.83 -3.47 -3.47 -3.47 1.03 -2.37 -3.47 -3.47 -2.77 -2.08 C | 0.25 1.67 -2.89 -2.89 -1.50 -1.79 1.68 1.68 -2.89 1.25 G | 1.12 -2.89 1.68 1.68 -1.79 -1.50 -2.89 -2.89 1.67 -0.69 T | -1.52 -2.77 -3.47 -3.47 -2.37 1.03 -3.47 -3.47 -3.47 -0.25
02 / COMPARATIVE BENCHMARKS
Alternative candidate matrices 3
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
TBS1Badis et. al.P = 2.59e-08View matrix ↘
Fisher’s P-value2.59e-08
Information content11.46
Max PWM score10.92
Recommended cutoff8.67
Position frequency matrix (PFM)
A | 0.12 0.03 0.02 0.76 0.20 0.01 0.01 0.08 C | 0.78 0.03 0.02 0.08 0.13 0.97 0.97 0.08 G | 0.05 0.91 0.94 0.08 0.13 0.01 0.01 0.76 T | 0.05 0.03 0.02 0.08 0.54 0.01 0.01 0.08
Position count matrix (PCM)
A | 12 3 2 76 20 1 1 8 C | 78 3 2 8 13 97 97 8 G | 5 91 94 8 13 1 1 76 T | 5 3 2 8 54 1 1 8
Position weight matrix (PWM)
A | -0.98 -2.37 -2.77 0.86 -0.47 -3.47 -3.47 -1.39 C | 1.47 -1.79 -2.20 -0.81 -0.33 1.68 1.68 -0.81 G | -1.28 1.62 1.65 -0.81 -0.33 -2.89 -2.89 1.44 T | -1.86 -2.37 -2.77 -1.39 0.52 -3.47 -3.47 -1.39
TBS1Foat et. al.P = 1View matrix ↘
Fisher’s P-value1
Information content19.52
Max PWM score20.21
Recommended cutoff15.16
Position frequency matrix (PFM)
A | 0.14 0.73 0.01 0.01 0.01 0.02 0.47 0.12 0.57 0.27 0.01 0.78 0.40 0.01 0.41 0.01 0.06 0.96 0.18 0.26 C | 0.53 0.24 0.27 0.01 0.01 0.01 0.50 0.26 0.29 0.19 0.05 0.02 0.01 0.01 0.19 0.01 0.03 0.03 0.52 0.03 G | 0.32 0.01 0.31 0.97 0.97 0.03 0.02 0.60 0.01 0.28 0.14 0.19 0.36 0.59 0.14 0.97 0.01 0.01 0.01 0.65 T | 0.01 0.02 0.41 0.01 0.01 0.94 0.01 0.02 0.14 0.26 0.80 0.01 0.23 0.39 0.26 0.01 0.90 0.01 0.29 0.06
Position count matrix (PCM)
A | 14 73 1 1 1 2 47 12 56 27 1 78 40 1 41 1 6 96 18 26 C | 53 24 27 1 1 1 50 26 28 19 5 2 1 1 19 1 3 3 52 3 G | 32 1 31 97 97 3 2 60 1 28 14 19 36 59 14 97 1 1 1 65 T | 1 2 41 1 1 94 1 2 14 26 80 1 23 39 26 1 90 1 28 6
Position weight matrix (PWM)
A | -0.83 0.82 -3.47 -3.47 -3.47 -2.77 0.38 -0.98 0.58 -0.17 -3.47 0.89 0.22 -3.47 0.25 -3.47 -1.67 1.10 -0.58 -0.21 C | 1.08 0.29 0.41 -2.89 -2.89 -2.89 1.02 0.37 0.48 0.05 -1.28 -2.20 -2.89 -2.89 0.05 -2.89 -1.79 -1.79 1.06 -1.79 G | 0.58 -2.89 0.54 1.68 1.68 -1.79 -2.20 1.20 -2.89 0.44 -0.25 0.05 0.69 1.19 -0.25 1.68 -2.89 -2.89 -2.89 1.28 T | -3.47 -2.77 0.25 -3.47 -3.47 1.08 -3.47 -2.77 -0.83 -0.21 0.92 -3.47 -0.33 0.20 -0.21 -3.47 1.03 -3.47 -0.10 -1.67
TBS1Zhao and StormoP = 1.50e-05View matrix ↘
Fisher’s P-value1.50e-05
Information content7.519
Max PWM score7.5
Recommended cutoff7.3
Position frequency matrix (PFM)
A | 0.141 0.418 0.113 0.001 0.001 0.054 0.145 C | 0.237 0.135 0.150 0.997 0.994 0.001 0.401 G | 0.415 0.194 0.180 0.001 0.004 0.908 0.142 T | 0.206 0.254 0.557 0.001 0.001 0.038 0.312
Position count matrix (PCM)
A | 14 41 11 0 0 5 14 C | 23 13 15 99 99 0 40 G | 41 19 18 0 0 90 14 T | 20 25 55 0 0 3 31
Position weight matrix (PWM)
A | -0.82 0.27 -1.04 -5.77 -5.77 -1.78 -0.79 C | 0.28 -0.29 -0.18 1.71 1.71 -5.19 0.80 G | 0.84 0.07 0.00 -5.19 -3.81 1.62 -0.24 T | -0.44 -0.23 0.55 -5.77 -5.77 -2.13 -0.03
03 / EXPERIMENTAL CONTEXT
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 18 genes
YBR009C, YBR010W, YBR109C, YBR110W, YCR028C, YDR278C, YDR279W, YDR370C, YDR371W, YER044C, YGR106C, YHL012W, YHL013C, YKL062W, YKL072W, YLR011W, YML005W, YPR142C
Genes affected by TF deletion 50 genes
YIL112W, YOL047C, YDL131W, YLR279W, YLR460C, YPL016W, YPR081C, YLR184W, YML089C, YPL148C, YIR027C, YMR136W, YNL180C, YOR235W, YOR009W, YIL087C, YER001W, YGL018C, YOR008C-A, YOR072W, YOL084W, YJL217W, YFL014W, YMR319C, YKR093W, YOL058W, YOR273C, YDR210W, YKL062W, YKL096W, YLR108C, YDR209C, YKL120W, YNL195C, YNL160W, YOL119C, YFR056C, YER163C, YMR034C, YEL037C, YFR055W, YGL032C, YHR137W, YKL096W-A, YOR024W, YDR122W, YCR102C, YLR395C, YNL134C, YPL165C
Genes supported by both experiments 1 genes
YKL062W