SWI6
YLR182W, SDS11, PSL8
Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; localization regulated by phosphorylation; potential Cdc28p substrate
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.335 0.884 0.019 0.226 0.001 0.170 C | 0.034 0.017 0.899 0.001 0.981 0.001 G | 0.567 0.087 0.001 0.772 0.001 0.828 T | 0.064 0.012 0.081 0.001 0.017 0.001
A | 33 88 1 22 0 17 C | 3 1 89 0 98 0 G | 56 8 0 77 0 82 T | 6 1 8 0 1 0
A | 0.05 1.02 -2.82 -0.35 -5.77 -0.63 C | -1.67 -2.36 1.61 -5.19 1.70 -5.19 G | 1.15 -0.73 -5.19 1.46 -5.19 1.53 T | -1.61 -3.28 -1.37 -5.77 -2.94 -5.77
Alternative candidate matrices 3
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
SWI6Foat et. al.P = 5.06e-34View matrix ↘
A | 0.39 0.01 0.01 0.01 0.01 0.27 0.16 0.16 0.02 C | 0.01 0.97 0.01 0.71 0.01 0.11 0.48 0.28 0.44 G | 0.01 0.01 0.97 0.01 0.97 0.21 0.01 0.22 0.29 T | 0.59 0.01 0.01 0.27 0.01 0.41 0.35 0.34 0.25
A | 39 1 1 1 1 27 16 16 2 C | 1 97 1 71 1 11 48 28 44 G | 1 1 97 1 97 21 1 22 28 T | 59 1 1 27 1 41 35 34 25
A | 0.20 -3.47 -3.47 -3.47 -3.47 -0.17 -0.69 -0.69 -2.77 C | -2.89 1.68 -2.89 1.37 -2.89 -0.49 0.98 0.44 0.89 G | -2.89 -2.89 1.68 -2.89 1.68 0.15 -2.89 0.20 0.48 T | 0.61 -3.47 -3.47 -0.17 -3.47 0.25 0.09 0.06 -0.25
SWI6Harbison et. al.P = 6.40e-34View matrix ↘
A | 0.080 0.086 0.236 0.025 0.011 0.004 0.024 0.174 C | 0.108 0.083 0.075 0.785 0.031 0.907 0.053 0.139 G | 0.041 0.127 0.088 0.155 0.928 0.003 0.869 0.109 T | 0.772 0.703 0.600 0.035 0.030 0.086 0.054 0.579
A | 8 8 23 2 1 0 2 17 C | 10 8 7 78 3 90 5 13 G | 4 12 8 15 92 0 86 10 T | 77 70 60 3 3 8 5 57
A | -1.39 -1.31 -0.30 -2.55 -3.37 -4.38 -2.59 -0.61 C | -0.51 -0.77 -0.88 1.47 -1.76 1.62 -1.22 -0.26 G | -1.48 -0.35 -0.72 -0.15 1.64 -4.09 1.57 -0.50 T | 0.88 0.79 0.63 -2.21 -2.37 -1.31 -1.78 0.59
SWI6Pachkov et alP = 9.57e-30View matrix ↘
A | 0.435 0.505 0.003 0.379 0.001 0.017 0.928 0.979 0.951 0.671 C | 0.052 0.203 0.941 0.017 0.994 0.215 0.006 0.006 0.009 0.096 G | 0.356 0.092 0.016 0.602 0.001 0.768 0.013 0.010 0.004 0.021 T | 0.157 0.200 0.040 0.002 0.006 0.001 0.053 0.005 0.036 0.212
A | 43 50 0 37 0 1 92 97 95 67 C | 5 20 94 1 99 21 0 0 0 9 G | 35 9 1 60 0 76 1 1 0 2 T | 15 20 4 0 0 0 5 0 3 21
A | 0.31 0.46 -4.67 0.17 -5.77 -2.94 1.06 1.12 1.09 0.74 C | -1.24 0.12 1.65 -2.36 1.71 0.18 -3.40 -3.40 -3.00 -0.63 G | 0.68 -0.67 -2.42 1.21 -5.19 1.45 -2.63 -2.89 -3.81 -2.15 T | -0.71 -0.47 -2.08 -5.08 -3.98 -5.77 -1.80 -4.16 -2.18 -0.41
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 230 genes
YAL040C, YBL029W, YBR007C, YBR070C, YBR071W, YBR077C, YBR078W, YCL063W, YCL064C, YCR064C, YCR065W, YDL003W, YDL017W, YDL018C, YDL032W, YDL035C, YDL055C, YDL101C, YDL126C, YDL127W, YDL211C, YDL227C, YDR010C, YDR011W, YDR113C, YDR115W, YDR133C, YDR134C, YDR224C, YDR225W, YDR263C, YDR297W, YDR309C, YDR324C, YDR325W, YDR451C, YDR452W, YDR453C, YDR500C, YDR501W, YDR507C, YDR508C, YDR509W, YDR510W, YDR524C, YDR525W, YDR526C, YEL007W, YEL040W, YER001W, YER070W, YER078C, YER079W, YER094C, YER095W, YER111C, YER112W, YER145C, YER146W, YER177W, YFL013W-A, YFR017C, YGL038C, YGL179C, YGL239C, YGL253W, YGR013W, YGR014W, YGR041W, YGR109C, YGR109W-A, YGR109W-B, YGR110W, YGR111W, YGR140W, YGR151C, YGR152C, YGR153W, YGR180C, YGR188C, YGR189C, YGR221C, YGR249W, YGR279C, YHL028W, YHL029C, YHR002W, YHR061C, YHR143W, YHR149C, YHR150W, YHR151C, YHR152W, YHR193C, YHR194W, YIL026C, YIL056W, YIL121W, YIL123W, YIL159W, YIL160C, YJL045W, YJL092W, YJL093C, YJL115W, YJL116C, YJL148W, YJL158C, YJL184W, YJL185C, YJL186W, YJL187C, YJL194W, YJL196C, YJR044C, YJR054W, YJR091C, YJR092W, YJR145C, YJR146W, YJR147W, YJR148W, YKL007W, YKL008C, YKL044W, YKL066W, YKL067W, YKL096W, YKL096W-A, YKL097C, YKL112W, YKL113C, YKR011C, YKR013W, YKR040C, YKR042W, YLR055C, YLR056W, YLR084C, YLR103C, YLR104W, YLR105C, YLR110C, YLR111W, YLR300W, YLR332W, YLR342W, YLR437C, YLR438W, YLR439W, YML007W, YML008C, YML027W, YML100W, YML101C, YML102C-A, YMR016C, YMR017W, YMR070W, YMR076C, YMR122C, YMR135C, YMR136W, YMR144W, YMR165C, YMR179W, YMR199W, YMR215W, YMR261C, YMR262W, YMR279C, YMR304C-A, YMR305C, YMR306C-A, YMR306W, YMR307W, YMR308C, YNL231C, YNL241C, YNL273W, YNL274C, YNL289W, YNL298W, YNL300W, YNL301C, YNL312W, YNL313C, YNR009W, YNR016C, YNR018W, YNR044W, YOL011W, YOL012C, YOL113W, YOL114C, YOR042W, YOR074C, YOR075W, YOR138C, YOR140W, YOR236W, YOR246C, YOR247W, YOR248W, YOR315W, YOR344C, YOR372C, YOR373W, YOR378W, YPL024W, YPL025C, YPL056C, YPL081W, YPL082C, YPL126W, YPL127C, YPL163C, YPL230W, YPL255W, YPL256C, YPR009W, YPR075C, YPR119W, YPR120C, YPR145W, YPR151C, YPR158C-C, YPR158C-D, YPR159W, YPR185W
Genes affected by TF deletion 229 genes
YDR368W, YER118C, YER178W, YJR048W, YOL017W, YBR187W, YEL046C, YKL043W, YKL045W, YKL049C, YLR400W, YLR461W, YLR432W, YCL049C, YER111C, YER140W, YER171W, YER142C, YER144C, YKR076W, YMR009W, YMR015C, YPL177C, YEL041W, YEL015W, YLR028C, YLR433C, YLR405W, YOR036W, YPL016W, YFL013W-A, YOR359W, YBR255W, YER053C, YER082C, YER055C, YER028C, YER086W, YER030W, YER087W, YGR250C, YLR182W, YML027W, YML058C-A, YNR030W, YNL307C, YDR127W, YDR159W, YDR461W, YDR499W, YDR530C, YNL142W, YNL146W, YNL116W, YOR086C, YBR256C, YDL161W, YER023W, YER052C, YER081W, YER083C, YER027C, YIL015W, YHR209W, YIL051C, YLR121C, YNL300W, YNL332W, YNL306W, YPL111W, YPL081W, YER042W, YBR012C, YDR380W, YER149C, YER123W, YIL120W, YIL156W, YMR020W, YNL024C, YOR201C, YPL245W, YER002W, YER004W, YER006W, YMR234W, YBL094C, YCL064C, YIL117C, YNL055C, YNR070W, YOR200W, YPL212C, YPL244C, YPL214C, YBR168W, YER001W, YEL020C, YEL053C, YER005W, YNL252C, YBR070C, YDL011C, YDR106W, YFL018C, YHR091C, YOL150C, YOR355W, YPR024W, YPL195W, YBR265W, YER092W, YER038C, YPL092W, YBR071W, YDR501W, YDR532C, YDR534C, YHR030C, YJR156C, YOL113W, YAR075W, YBL002W, YCL025C, YER031C, YER059W, YER037W, YGR257C, YHR216W, YJL158C, YMR317W, YPL091W, YIL130W, YNR075W, YPL257W-A, YDL084W, YEL058W, YKL096W, YLR447C, YER126C, YER156C, YER158C, YER188W, YLR294C, YNL096C, YPL251W, YPL226W, YMR008C, YEL059C-A, YEL029C, YEL060C, YLR103C, YLR448W, YMR173W-A, YPL061W, YPL032C, YPL063W, YPL004C, YGR079W, YMR120C, YBR273C, YER095W, YDR174W, YLR321C, YLR355C, YOL151W, YER094C, YER098W, YER044C, YJL196C, YKL216W, YKL218C, YLR203C, YNR044W, YPL127C, YPL163C, YBR028C, YHL004W, YLR297W, YLR299W, YOR247W, YAL062W, YEL036C, YEL038W, YEL040W, YJL079C, YLR054C, YLR455W, YDR055W, YER134C, YER163C, YER136W, YLR269C, YLR300W, YOL007C, YOR276W, YOR248W, YPL234C, YPL263C, YBR182C, YEL037C, YGL032C, YHR137W, YKL096W-A, YLR452C, YHR105W, YLL058W, YMR093W, YOL166C, YOR375C, YOR034C, YER048C, YER049W, YER107C, YNL014W, YFR027W, YGR086C, YLR327C, YLR363C, YNL166C, YOL161C, YOL101C, YOR338W, YPR069C, YPR011C, YER073W, YER050C, YER079W, YPL103C
Genes supported by both experiments 26 genes
YBR070C, YBR071W, YCL064C, YDR501W, YEL040W, YER001W, YER079W, YER094C, YER095W, YER111C, YFL013W-A, YJL158C, YJL196C, YKL096W, YKL096W-A, YLR103C, YLR300W, YML027W, YNL300W, YNR044W, YOL113W, YOR247W, YOR248W, YPL081W, YPL127C, YPL163C
Predicted TF–TF partners 15 genes
ABF1, ASH1, FKH1, HAC1, MBP1, MCM1, MET28, NDD1, REB1, RTG3, STB1, STB2, STB3, SWI4, YDR026C