← All factors / TF RECORD

STE12

YHR084W

View at SGD ↗

Transcription factor that is activated by a MAP kinase signaling cascade, activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth

01 / RECOMMENDED MATRIX

Best-performing DNA-binding model.

RecommendedSource: Badis et. al.
Fisher’s P-value2.08e-25
Information content10.93
Max PWM score8.72
Recommended cutoff7.55
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.01 0.01 0.97 0.97 0.97 0.01 0.80 
C | 0.01 0.01 0.01 0.01 0.01 0.97 0.03 
G | 0.01 0.97 0.01 0.01 0.01 0.01 0.14 
T | 0.97 0.01 0.01 0.01 0.01 0.01 0.03 
Position count matrix (PCM)
A |   1   1  97  97  97   1  80 
C |   1   1   1   1   1  97   3 
G |   1  97   1   1   1   1  14 
T |  97   1   1   1   1   1   3 
Position weight matrix (PWM)
A | -3.47 -3.47  1.11  1.11  1.11 -3.47  0.92 
C | -2.89 -2.89 -2.89 -2.89 -2.89  1.68 -1.79 
G | -2.89  1.68 -2.89 -2.89 -2.89 -2.89 -0.25 
T |  1.11 -3.47 -3.47 -3.47 -3.47 -3.47 -2.37 
02 / COMPARATIVE BENCHMARKS

Alternative candidate matrices 32

Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.

STE12_AFoat et. al.P = 1.39e-15View matrix ↘
Sequence logo for STE12_A
Fisher’s P-value1.39e-15
Information content17.01
Max PWM score14.54
Recommended cutoff11.04
Position frequency matrix (PFM)
A | 0.01 0.06 0.01 0.01 0.01 0.05 0.03 0.01 0.97 0.84 0.88 0.01 
C | 0.93 0.01 0.01 0.01 0.06 0.31 0.01 0.97 0.01 0.03 0.06 0.77 
G | 0.01 0.01 0.01 0.97 0.01 0.01 0.03 0.01 0.01 0.12 0.05 0.01 
T | 0.05 0.93 0.97 0.01 0.93 0.63 0.93 0.01 0.01 0.01 0.01 0.22 
Position count matrix (PCM)
A |   1   6   1   1   1   5   3   1  97  84  88   1 
C |  93   1   1   1   6  31   1  97   1   3   6  77 
G |   1   1   1  97   1   1   3   1   1  12   5   1 
T |   5  93  97   1  93  63  93   1   1   1   1  22 
Position weight matrix (PWM)
A | -3.47 -1.67 -3.47 -3.47 -3.47 -1.86 -2.37 -3.47  1.11  0.97  1.01 -3.47 
C |  1.64 -2.89 -2.89 -2.89 -1.10  0.54 -2.89  1.68 -2.89 -1.79 -1.10  1.45 
G | -2.89 -2.89 -2.89  1.68 -2.89 -2.89 -1.79 -2.89 -2.89 -0.41 -1.28 -2.89 
T | -1.86  1.07  1.11 -3.47  1.07  0.68  1.07 -3.47 -3.47 -3.47 -3.47 -0.37 
STE12_AAFoat et. al.P = 0.002207View matrix ↘
Sequence logo for STE12_AA
Fisher’s P-value0.002207
Information content16.56
Max PWM score13.91
Recommended cutoff9.72
Position frequency matrix (PFM)
A | 0.06 0.01 0.01 0.01 0.01 0.01 0.01 0.83 0.97 0.66 0.27 0.04 
C | 0.01 0.03 0.97 0.01 0.01 0.01 0.04 0.16 0.01 0.01 0.37 0.03 
G | 0.01 0.95 0.01 0.97 0.01 0.01 0.01 0.01 0.01 0.33 0.01 0.03 
T | 0.92 0.01 0.01 0.01 0.97 0.97 0.94 0.01 0.01 0.01 0.36 0.90 
Position count matrix (PCM)
A |   6   1   1   1   1   1   1  83  97  66  27   4 
C |   1   3  97   1   1   1   4  16   1   1  37   3 
G |   1  95   1  97   1   1   1   1   1  33   1   3 
T |  92   1   1   1  97  97  94   1   1   1  36  90 
Position weight matrix (PWM)
A | -1.67 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47  0.95  1.11  0.72 -0.17 -2.08 
C | -2.89 -1.79  1.68 -2.89 -2.89 -2.89 -1.50 -0.12 -2.89 -2.89  0.72 -1.79 
G | -2.89  1.66 -2.89  1.68 -2.89 -2.89 -2.89 -2.89 -2.89  0.61 -2.89 -1.79 
T |  1.06 -3.47 -3.47 -3.47  1.11  1.11  1.08 -3.47 -3.47 -3.47  0.12  1.03 
STE12_BFoat et. al.P = 9.22e-25View matrix ↘
Sequence logo for STE12_B
Fisher’s P-value9.22e-25
Information content9.291
Max PWM score8.09
Recommended cutoff7.43
Position frequency matrix (PFM)
A | 0.47 0.01 0.97 0.97 0.01 0.01 0.02 
C | 0.07 0.01 0.01 0.01 0.01 0.01 0.34 
G | 0.46 0.97 0.01 0.01 0.01 0.81 0.09 
T | 0.01 0.01 0.01 0.01 0.97 0.17 0.55 
Position count matrix (PCM)
A |  47   1  97  97   1   1   2 
C |   7   1   1   1   1   1  34 
G |  46  97   1   1   1  81   9 
T |   1   1   1   1  97  17  55 
Position weight matrix (PWM)
A |  0.38 -3.47  1.11  1.11 -3.47 -3.47 -2.77 
C | -0.94 -2.89 -2.89 -2.89 -2.89 -2.89  0.64 
G |  0.94  1.68 -2.89 -2.89 -2.89  1.50 -0.69 
T | -3.47 -3.47 -3.47 -3.47  1.11 -0.63  0.54 
STE12_CFoat et. al.P = 1View matrix ↘
Sequence logo for STE12_C
Fisher’s P-value1
Information content18.27
Max PWM score16.38
Recommended cutoff12.29
Position frequency matrix (PFM)
A | 0.88 0.21 0.01 0.34 0.01 0.01 0.43 0.07 0.01 0.01 0.97 0.74 0.01 0.01 
C | 0.04 0.01 0.01 0.28 0.97 0.01 0.01 0.05 0.01 0.01 0.01 0.01 0.17 0.01 
G | 0.01 0.75 0.08 0.35 0.01 0.01 0.54 0.87 0.01 0.97 0.01 0.02 0.01 0.01 
T | 0.07 0.03 0.90 0.02 0.01 0.97 0.02 0.01 0.97 0.01 0.01 0.24 0.81 0.97 
Position count matrix (PCM)
A |  88  21   1  34   1   1  43   7   1   1  97  74   1   1 
C |   4   1   1  28  97   1   1   5   1   1   1   1  17   1 
G |   1  75   8  35   1   1  54  87   1  97   1   2   1   1 
T |   7   3  90   2   1  97   2   1  97   1   1  24  81  97 
Position weight matrix (PWM)
A |  1.01 -0.42 -3.47  0.06 -3.47 -3.47  0.30 -1.52 -3.47 -3.47  1.11  0.84 -3.47 -3.47 
C | -1.50 -2.89 -2.89  0.44  1.68 -2.89 -2.89 -1.28 -2.89 -2.89 -2.89 -2.89 -0.06 -2.89 
G | -2.89  1.43 -0.81  0.66 -2.89 -2.89  1.10  1.58 -2.89  1.68 -2.89 -2.20 -2.89 -2.89 
T | -1.52 -2.37  1.03 -2.77 -3.47  1.11 -2.77 -3.47  1.11 -3.47 -3.47 -0.29  0.93  1.11 
STE12_DFoat et. al.P = 2.54e-05View matrix ↘
Sequence logo for STE12_D
Fisher’s P-value2.54e-05
Information content18.08
Max PWM score15.92
Recommended cutoff10.94
Position frequency matrix (PFM)
A | 0.01 0.01 0.01 0.06 0.01 0.01 0.01 0.01 0.97 0.12 0.19 0.02 
C | 0.07 0.01 0.36 0.01 0.02 0.01 0.52 0.97 0.01 0.01 0.79 0.02 
G | 0.84 0.97 0.01 0.92 0.67 0.03 0.01 0.01 0.01 0.86 0.01 0.01 
T | 0.08 0.01 0.63 0.01 0.30 0.95 0.47 0.01 0.01 0.01 0.01 0.95 
Position count matrix (PCM)
A |   1   1   1   6   1   1   1   1  97  12  19   2 
C |   7   1  36   1   2   1  52  97   1   1  79   2 
G |  84  97   1  92  67   3   1   1   1  86   1   1 
T |   8   1  63   1  30  95  47   1   1   1   1  95 
Position weight matrix (PWM)
A | -3.47 -3.47 -3.47 -1.67 -3.47 -3.47 -3.47 -3.47  1.11 -0.98 -0.52 -2.77 
C | -0.94 -2.89  0.69 -2.89 -2.20 -2.89  1.06  1.68 -2.89 -2.89  1.48 -2.20 
G |  1.54  1.68 -2.89  1.63  1.31 -1.79 -2.89 -2.89 -2.89  1.56 -2.89 -2.89 
T | -1.39 -3.47  0.68 -3.47 -0.06  1.09  0.38 -3.47 -3.47 -3.47 -3.47  1.09 
STE12_EFoat et. al.P = 4.12e-21View matrix ↘
Sequence logo for STE12_E
Fisher’s P-value4.12e-21
Information content9.726
Max PWM score9.41
Recommended cutoff7.53
Position frequency matrix (PFM)
A | 0.01 0.01 0.01 0.11 0.07 0.01 0.70 0.27 0.65 
C | 0.35 0.01 0.07 0.12 0.01 0.92 0.01 0.10 0.32 
G | 0.07 0.97 0.01 0.01 0.01 0.06 0.01 0.48 0.01 
T | 0.58 0.01 0.92 0.76 0.91 0.01 0.29 0.14 0.02 
Position count matrix (PCM)
A |   1   1   1  11   7   1  70  27  65 
C |  35   1   7  12   1  92   1  10  32 
G |   7  97   1   1   1   6   1  48   1 
T |  57   1  92  76  91   1  28  14   2 
Position weight matrix (PWM)
A | -3.47 -3.47 -3.47 -1.07 -1.52 -3.47  0.78 -0.17  0.71 
C |  0.66 -2.89 -0.94 -0.41 -2.89  1.63 -2.89 -0.59  0.58 
G | -0.94  1.68 -2.89 -2.89 -2.89 -1.10 -2.89  0.98 -2.89 
T |  0.59 -3.47  1.06  0.86  1.05 -3.47 -0.10 -0.83 -2.77 
STE12_FFoat et. al.P = 0.00281View matrix ↘
Sequence logo for STE12_F
Fisher’s P-value0.00281
Information content16.32
Max PWM score14.71
Recommended cutoff11
Position frequency matrix (PFM)
A | 0.97 0.15 0.01 0.82 0.01 0.01 0.02 0.58 0.01 0.01 0.01 0.03 
C | 0.01 0.09 0.01 0.16 0.01 0.97 0.96 0.01 0.97 0.17 0.66 0.01 
G | 0.01 0.48 0.04 0.01 0.01 0.01 0.01 0.41 0.01 0.01 0.01 0.74 
T | 0.01 0.28 0.94 0.01 0.97 0.01 0.01 0.01 0.01 0.81 0.31 0.23 
Position count matrix (PCM)
A |  97  15   1  82   1   1   2  57   1   1   1   3 
C |   1   9   1  16   1  97  96   1  97  17  66   1 
G |   1  48   4   1   1   1   1  41   1   1   1  74 
T |   1  28  94   1  97   1   1   1   1  81  31  23 
Position weight matrix (PWM)
A |  1.11 -0.76 -3.47  0.94 -3.47 -3.47 -2.77  0.59 -3.47 -3.47 -3.47 -2.37 
C | -2.89 -0.69 -2.89 -0.12 -2.89  1.68  1.67 -2.89  1.68 -0.06  1.30 -2.89 
G | -2.89  0.98 -1.50 -2.89 -2.89 -2.89 -2.89  0.82 -2.89 -2.89 -2.89  1.41 
T | -3.47 -0.13  1.08 -3.47  1.11 -3.47 -3.47 -3.47 -3.47  0.93 -0.03 -0.33 
STE12_GFoat et. al.P = 2.09e-16View matrix ↘
Sequence logo for STE12_G
Fisher’s P-value2.09e-16
Information content12.63
Max PWM score12.13
Recommended cutoff9.11
Position frequency matrix (PFM)
A | 0.10 0.01 0.05 0.01 0.04 0.26 0.25 0.01 0.97 0.50 0.87 0.10 
C | 0.74 0.04 0.05 0.01 0.01 0.13 0.01 0.97 0.01 0.19 0.03 0.35 
G | 0.05 0.32 0.09 0.97 0.01 0.01 0.04 0.01 0.01 0.28 0.06 0.01 
T | 0.11 0.63 0.82 0.01 0.95 0.60 0.71 0.01 0.01 0.03 0.04 0.54 
Position count matrix (PCM)
A |  10   1   5   1   4  26  25   1  97  50  87  10 
C |  74   4   5   1   1  13   1  97   1  19   3  35 
G |   5  32   9  97   1   1   4   1   1  28   6   1 
T |  11  63  82   1  95  60  71   1   1   3   4  54 
Position weight matrix (PWM)
A | -1.16 -3.47 -1.86 -3.47 -2.08 -0.21 -0.25 -3.47  1.11  0.45  1.00 -1.16 
C |  1.41 -1.50 -1.28 -2.89 -2.89 -0.33 -2.89  1.68 -2.89  0.05 -1.79  0.66 
G | -1.28  0.58 -0.69  1.68 -2.89 -2.89 -1.50 -2.89 -2.89  0.44 -1.10 -2.89 
T | -1.07  0.68  0.94 -3.47  1.09  0.63  0.80 -3.47 -3.47 -2.37 -2.08  0.52 
STE12_HFoat et. al.P = 0.005196View matrix ↘
Sequence logo for STE12_H
Fisher’s P-value0.005196
Information content18.66
Max PWM score15.81
Recommended cutoff11.06
Position frequency matrix (PFM)
A | 0.01 0.03 0.01 0.01 0.01 0.04 0.01 0.01 0.97 0.01 0.97 0.13 
C | 0.97 0.01 0.01 0.01 0.01 0.01 0.01 0.32 0.01 0.11 0.01 0.85 
G | 0.01 0.01 0.01 0.97 0.01 0.77 0.01 0.67 0.01 0.81 0.01 0.01 
T | 0.01 0.95 0.97 0.01 0.97 0.18 0.97 0.01 0.01 0.07 0.01 0.02 
Position count matrix (PCM)
A |   1   3   1   1   1   4   1   1  97   1  97  13 
C |  97   1   1   1   1   1   1  32   1  11   1  85 
G |   1   1   1  97   1  77   1  67   1  81   1   1 
T |   1  95  97   1  97  18  97   1   1   7   1   2 
Position weight matrix (PWM)
A | -3.47 -2.37 -3.47 -3.47 -3.47 -2.08 -3.47 -3.47  1.11 -3.47  1.11 -0.90 
C |  1.68 -2.89 -2.89 -2.89 -2.89 -2.89 -2.89  0.58 -2.89 -0.49 -2.89  1.55 
G | -2.89 -2.89 -2.89  1.68 -2.89  1.45 -2.89  1.31 -2.89  1.50 -2.89 -2.89 
T | -3.47  1.09  1.11 -3.47  1.11 -0.58  1.11 -3.47 -3.47 -1.52 -3.47 -2.77 
STE12_IFoat et. al.P = 1.67e-09View matrix ↘
Sequence logo for STE12_I
Fisher’s P-value1.67e-09
Information content13.24
Max PWM score12.71
Recommended cutoff8.2
Position frequency matrix (PFM)
A | 0.19 0.01 0.01 0.01 0.01 0.02 0.02 0.01 0.83 0.01 0.68 0.01 
C | 0.28 0.29 0.01 0.01 0.01 0.12 0.01 0.81 0.01 0.49 0.03 0.54 
G | 0.53 0.23 0.08 0.97 0.01 0.01 0.07 0.17 0.15 0.38 0.21 0.05 
T | 0.01 0.48 0.91 0.01 0.97 0.85 0.90 0.01 0.01 0.13 0.08 0.41 
Position count matrix (PCM)
A |  19   1   1   1   1   2   2   1  83   1  68   1 
C |  28  28   1   1   1  12   1  81   1  49   3  54 
G |  53  23   8  97   1   1   7  17  15  38  21   5 
T |   1  48  91   1  97  85  90   1   1  13   8  41 
Position weight matrix (PWM)
A | -0.52 -3.47 -3.47 -3.47 -3.47 -2.77 -2.77 -3.47  0.95 -3.47  0.75 -3.47 
C |  0.44  0.48 -2.89 -2.89 -2.89 -0.41 -2.89  1.50 -2.89  1.00 -1.79  1.10 
G |  1.08  0.25 -0.81  1.68 -2.89 -2.89 -0.94 -0.06 -0.18  0.75  0.15 -1.28 
T | -3.47  0.41  1.05 -3.47  1.11  0.98  1.03 -3.47 -3.47 -0.90 -1.39  0.25 
STE12_JFoat et. al.P = 1.74e-21View matrix ↘
Sequence logo for STE12_J
Fisher’s P-value1.74e-21
Information content11.53
Max PWM score12.43
Recommended cutoff6.41
Position frequency matrix (PFM)
A | 0.24 0.13 0.36 0.69 0.01 0.87 0.97 0.03 0.04 0.01 0.09 
C | 0.48 0.45 0.01 0.06 0.01 0.01 0.01 0.01 0.01 0.45 0.02 
G | 0.05 0.16 0.63 0.23 0.97 0.01 0.01 0.01 0.80 0.01 0.61 
T | 0.24 0.26 0.01 0.02 0.01 0.11 0.01 0.95 0.15 0.54 0.28 
Position count matrix (PCM)
A |  24  13  36  69   1  87  97   3   4   1   9 
C |  48  45   1   6   1   1   1   1   1  45   2 
G |   5  16  63  23  97   1   1   1  80   1  61 
T |  24  26   1   2   1  11   1  95  15  54  28 
Position weight matrix (PWM)
A | -0.29 -0.90  0.12  0.77 -3.47  1.00  1.11 -2.37 -2.08 -3.47 -1.27 
C |  0.98  0.92 -2.89 -1.10 -2.89 -2.89 -2.89 -2.89 -2.89  0.92 -2.20 
G | -1.28 -0.12  1.25  0.25  1.68 -2.89 -2.89 -2.89  1.49 -2.89  1.22 
T | -0.29 -0.21 -3.47 -2.77 -3.47 -1.07 -3.47  1.09 -0.76  0.52 -0.13 
STE12_KFoat et. al.P = 2.03e-17View matrix ↘
Sequence logo for STE12_K
Fisher’s P-value2.03e-17
Information content8.822
Max PWM score8.96
Recommended cutoff7.17
Position frequency matrix (PFM)
A | 0.05 0.01 0.01 0.01 0.06 0.01 0.86 0.17 0.56 
C | 0.16 0.01 0.19 0.16 0.20 0.97 0.13 0.26 0.25 
G | 0.14 0.97 0.01 0.12 0.07 0.01 0.01 0.44 0.11 
T | 0.66 0.01 0.79 0.71 0.67 0.01 0.01 0.13 0.08 
Position count matrix (PCM)
A |   5   1   1   1   6   1  86  17  56 
C |  16   1  19  16  20  97  13  26  25 
G |  14  97   1  12   7   1   1  44  11 
T |  66   1  79  71  67   1   1  13   8 
Position weight matrix (PWM)
A | -1.86 -3.47 -3.47 -3.47 -1.67 -3.47  0.99 -0.63  0.56 
C | -0.12 -2.89  0.05 -0.12  0.11  1.68 -0.33  0.37  0.33 
G | -0.25  1.68 -2.89 -0.41 -0.94 -2.89 -2.89  0.89 -0.49 
T |  0.72 -3.47  0.90  0.80  0.74 -3.47 -3.47 -0.90 -1.39 
STE12_LFoat et. al.P = 7.44e-09View matrix ↘
Sequence logo for STE12_L
Fisher’s P-value7.44e-09
Information content17
Max PWM score14.89
Recommended cutoff7.84
Position frequency matrix (PFM)
A | 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.97 0.01 0.53 0.04 
C | 0.08 0.29 0.01 0.01 0.01 0.82 0.01 0.96 0.01 0.01 0.01 0.82 
G | 0.90 0.05 0.17 0.97 0.01 0.01 0.03 0.02 0.01 0.76 0.02 0.01 
T | 0.01 0.65 0.81 0.01 0.97 0.16 0.95 0.01 0.01 0.22 0.45 0.13 
Position count matrix (PCM)
A |   1   1   1   1   1   1   1   1  97   1  53   4 
C |   8  28   1   1   1  82   1  96   1   1   1  82 
G |  90   5  17  97   1   1   3   2   1  76   2   1 
T |   1  65  81   1  97  16  95   1   1  22  45  13 
Position weight matrix (PWM)
A | -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47  1.11 -3.47  0.50 -2.08 
C | -0.81  0.48 -2.89 -2.89 -2.89  1.52 -2.89  1.67 -2.89 -2.89 -2.89  1.52 
G |  1.61 -1.28 -0.06  1.68 -2.89 -2.89 -1.79 -2.20 -2.89  1.44 -2.20 -2.89 
T | -3.47  0.71  0.93 -3.47  1.11 -0.69  1.09 -3.47 -3.47 -0.37  0.34 -0.90 
STE12_MFoat et. al.P = 6.62e-13View matrix ↘
Sequence logo for STE12_M
Fisher’s P-value6.62e-13
Information content12.86
Max PWM score12.52
Recommended cutoff7.34
Position frequency matrix (PFM)
A | 0.31 0.04 0.14 0.01 0.01 0.01 0.01 0.01 0.97 0.01 0.74 0.05 
C | 0.33 0.48 0.01 0.01 0.01 0.27 0.01 0.97 0.01 0.33 0.01 0.60 
G | 0.35 0.15 0.11 0.97 0.01 0.24 0.04 0.01 0.01 0.46 0.03 0.08 
T | 0.01 0.33 0.74 0.01 0.97 0.48 0.93 0.01 0.01 0.20 0.23 0.28 
Position count matrix (PCM)
A |  31   4  14   1   1   1   1   1  97   1  74   5 
C |  33  48   1   1   1  27   1  97   1  33   1  60 
G |  35  15  11  97   1  24   4   1   1  46   3   8 
T |   1  33  74   1  97  48  93   1   1  20  23  28 
Position weight matrix (PWM)
A | -0.03 -2.08 -0.83 -3.47 -3.47 -3.47 -3.47 -3.47  1.11 -3.47  0.84 -1.86 
C |  0.61  0.98 -2.89 -2.89 -2.89  0.41 -2.89  1.68 -2.89  0.61 -2.89  1.20 
G |  0.66 -0.18 -0.49  1.68 -2.89  0.29 -1.50 -2.89 -2.89  0.94 -1.79 -0.81 
T | -3.47  0.03  0.84 -3.47  1.11  0.41  1.07 -3.47 -3.47 -0.47 -0.33 -0.13 
STE12_NFoat et. al.P = 1.24e-25View matrix ↘
Sequence logo for STE12_N
Fisher’s P-value1.24e-25
Information content8.983
Max PWM score8.7
Recommended cutoff7.67
Position frequency matrix (PFM)
A | 0.10 0.01 0.01 0.01 0.18 0.01 0.97 0.26 0.51 
C | 0.25 0.01 0.01 0.05 0.11 0.85 0.01 0.28 0.29 
G | 0.07 0.97 0.01 0.07 0.03 0.13 0.01 0.28 0.08 
T | 0.58 0.01 0.97 0.87 0.67 0.01 0.01 0.18 0.12 
Position count matrix (PCM)
A |  10   1   1   1  18   1  97  26  51 
C |  25   1   1   5  11  85   1  28  28 
G |   7  97   1   7   3  13   1  28   8 
T |  57   1  97  87  67   1   1  18  12 
Position weight matrix (PWM)
A | -1.16 -3.47 -3.47 -3.47 -0.58 -3.47  1.11 -0.21  0.47 
C |  0.33 -2.89 -2.89 -1.28 -0.49  1.55 -2.89  0.44  0.48 
G | -0.94  1.68 -2.89 -0.94 -1.79 -0.33 -2.89  0.44 -0.81 
T |  0.59 -3.47  1.11  1.00  0.74 -3.47 -3.47 -0.58 -0.98 
STE12_OFoat et. al.P = 4.06e-18View matrix ↘
Sequence logo for STE12_O
Fisher’s P-value4.06e-18
Information content10.12
Max PWM score10.06
Recommended cutoff5.57
Position frequency matrix (PFM)
A | 0.35 0.39 0.10 0.01 0.01 0.01 0.13 0.01 0.93 0.20 0.51 
C | 0.42 0.08 0.18 0.01 0.01 0.01 0.28 0.96 0.05 0.35 0.33 
G | 0.01 0.17 0.15 0.97 0.01 0.10 0.01 0.01 0.01 0.36 0.09 
T | 0.22 0.36 0.57 0.01 0.97 0.88 0.58 0.02 0.01 0.08 0.07 
Position count matrix (PCM)
A |  35  39  10   1   1   1  13   1  93  20  51 
C |  42   8  18   1   1   1  28  96   5  35  33 
G |   1  17  15  97   1  10   1   1   1  36   9 
T |  22  36  56   1  97  88  57   2   1   8   7 
Position weight matrix (PWM)
A |  0.09  0.20 -1.16 -3.47 -3.47 -3.47 -0.90 -3.47  1.07 -0.47  0.47 
C |  0.85 -0.81  0.00 -2.89 -2.89 -2.89  0.44  1.67 -1.28  0.66  0.61 
G | -2.89 -0.06 -0.18  1.68 -2.89 -0.59 -2.89 -2.89 -2.89  0.69 -0.69 
T | -0.37  0.12  0.58 -3.47  1.11  1.01  0.59 -2.77 -3.47 -1.39 -1.52 
STE12_PFoat et. al.P = 2.45e-10View matrix ↘
Sequence logo for STE12_P
Fisher’s P-value2.45e-10
Information content17.32
Max PWM score16.65
Recommended cutoff8.93
Position frequency matrix (PFM)
A | 0.01 0.01 0.17 0.97 0.58 0.21 0.14 0.01 0.01 0.59 0.42 0.75 0.01 0.01 0.49 
C | 0.43 0.05 0.01 0.01 0.01 0.78 0.01 0.42 0.01 0.18 0.38 0.24 0.10 0.01 0.50 
G | 0.45 0.93 0.68 0.01 0.01 0.01 0.85 0.54 0.97 0.01 0.20 0.01 0.06 0.04 0.01 
T | 0.12 0.01 0.14 0.01 0.40 0.01 0.01 0.03 0.01 0.22 0.01 0.01 0.83 0.94 0.01 
Position count matrix (PCM)
A |   1   1  17  97  57  21  14   1   1  59  42  75   1   1  49 
C |  43   5   1   1   1  78   1  42   1  18  38  24  10   1  50 
G |  45  93  68   1   1   1  85  54  97   1  20   1   6   4   1 
T |  12   1  14   1  40   1   1   3   1  22   1   1  83  94   1 
Position weight matrix (PWM)
A | -3.47 -3.47 -0.63  1.11  0.59 -0.42 -0.83 -3.47 -3.47  0.61  0.27  0.85 -3.47 -3.47  0.43 
C |  0.87 -1.28 -2.89 -2.89 -2.89  1.47 -2.89  0.85 -2.89  0.00  0.75  0.29 -0.59 -2.89  1.02 
G |  0.92  1.64  1.33 -2.89 -2.89 -2.89  1.55  1.10  1.68 -2.89  0.11 -2.89 -1.10 -1.50 -2.89 
T | -0.98 -3.47 -0.83 -3.47  0.22 -3.47 -3.47 -2.37 -3.47 -0.37 -3.47 -3.47  0.95  1.08 -3.47 
STE12_QFoat et. al.P = 2.35e-22View matrix ↘
Sequence logo for STE12_Q
Fisher’s P-value2.35e-22
Information content8.977
Max PWM score8.42
Recommended cutoff6.67
Position frequency matrix (PFM)
A | 0.31 0.09 0.93 0.97 0.01 0.01 0.01 
C | 0.06 0.01 0.01 0.01 0.01 0.01 0.38 
G | 0.62 0.89 0.05 0.01 0.01 0.84 0.19 
T | 0.01 0.01 0.01 0.01 0.97 0.15 0.42 
Position count matrix (PCM)
A |  31   9  93  97   1   1   1 
C |   6   1   1   1   1   1  38 
G |  62  89   5   1   1  84  19 
T |   1   1   1   1  97  15  42 
Position weight matrix (PWM)
A | -0.03 -1.27  1.07  1.11 -3.47 -3.47 -3.47 
C | -1.10 -2.89 -2.89 -2.89 -2.89 -2.89  0.75 
G |  1.24  1.60 -1.28 -2.89 -2.89  1.54  0.05 
T | -3.47 -3.47 -3.47 -3.47  1.11 -0.76  0.27 
STE12_RFoat et. al.P = 7.71e-11View matrix ↘
Sequence logo for STE12_R
Fisher’s P-value7.71e-11
Information content13.06
Max PWM score13.18
Recommended cutoff8.23
Position frequency matrix (PFM)
A | 0.59 0.38 0.63 0.08 0.07 0.95 0.87 0.01 0.01 0.01 0.45 0.06 
C | 0.28 0.56 0.22 0.14 0.02 0.01 0.01 0.01 0.01 0.53 0.02 0.16 
G | 0.12 0.03 0.13 0.77 0.89 0.01 0.11 0.01 0.89 0.05 0.05 0.73 
T | 0.01 0.03 0.01 0.01 0.02 0.03 0.01 0.97 0.10 0.41 0.49 0.05 
Position count matrix (PCM)
A |  59  38  63   8   7  95  87   1   1   1  45   6 
C |  28  56  22  14   2   1   1   1   1  53   2  16 
G |  12   3  13  77  89   1  11   1  89   5   5  73 
T |   1   3   1   1   2   3   1  97  10  41  49   5 
Position weight matrix (PWM)
A |  0.61  0.17  0.68 -1.39 -1.52  1.09  1.00 -3.47 -3.47 -3.47  0.34 -1.67 
C |  0.44  1.13  0.20 -0.25 -2.20 -2.89 -2.89 -2.89 -2.89  1.08 -2.20 -0.12 
G | -0.41 -1.79 -0.33  1.45  1.60 -2.89 -0.49 -2.89  1.60 -1.28 -1.28  1.40 
T | -3.47 -2.37 -3.47 -3.47 -2.77 -2.37 -3.47  1.11 -1.16  0.25  0.43 -1.86 
STE12_SFoat et. al.P = 7.71e-11View matrix ↘
Sequence logo for STE12_S
Fisher’s P-value7.71e-11
Information content13.06
Max PWM score13.18
Recommended cutoff8.23
Position frequency matrix (PFM)
A | 0.59 0.38 0.63 0.08 0.07 0.95 0.87 0.01 0.01 0.01 0.45 0.06 
C | 0.28 0.56 0.22 0.14 0.02 0.01 0.01 0.01 0.01 0.53 0.02 0.16 
G | 0.12 0.03 0.13 0.77 0.89 0.01 0.11 0.01 0.89 0.05 0.05 0.73 
T | 0.01 0.03 0.01 0.01 0.02 0.03 0.01 0.97 0.10 0.41 0.49 0.05 
Position count matrix (PCM)
A |  59  38  63   8   7  95  87   1   1   1  45   6 
C |  28  56  22  14   2   1   1   1   1  53   2  16 
G |  12   3  13  77  89   1  11   1  89   5   5  73 
T |   1   3   1   1   2   3   1  97  10  41  49   5 
Position weight matrix (PWM)
A |  0.61  0.17  0.68 -1.39 -1.52  1.09  1.00 -3.47 -3.47 -3.47  0.34 -1.67 
C |  0.44  1.13  0.20 -0.25 -2.20 -2.89 -2.89 -2.89 -2.89  1.08 -2.20 -0.12 
G | -0.41 -1.79 -0.33  1.45  1.60 -2.89 -0.49 -2.89  1.60 -1.28 -1.28  1.40 
T | -3.47 -2.37 -3.47 -3.47 -2.77 -2.37 -3.47  1.11 -1.16  0.25  0.43 -1.86 
STE12_TFoat et. al.P = 1.65e-06View matrix ↘
Sequence logo for STE12_T
Fisher’s P-value1.65e-06
Information content18.24
Max PWM score21.32
Recommended cutoff10.66
Position frequency matrix (PFM)
A | 0.13 0.01 0.24 0.85 0.86 0.94 0.38 0.18 0.32 0.33 0.01 0.14 0.72 0.39 0.72 0.86 0.95 0.02 0.20 0.70 
C | 0.01 0.96 0.08 0.01 0.07 0.04 0.60 0.01 0.65 0.35 0.75 0.25 0.01 0.11 0.01 0.01 0.01 0.60 0.09 0.01 
G | 0.68 0.02 0.67 0.13 0.07 0.01 0.01 0.10 0.03 0.09 0.05 0.53 0.08 0.50 0.01 0.13 0.03 0.17 0.40 0.01 
T | 0.19 0.01 0.01 0.01 0.01 0.01 0.01 0.72 0.01 0.24 0.20 0.08 0.19 0.01 0.27 0.01 0.01 0.20 0.30 0.29 
Position count matrix (PCM)
A |  13   1  24  85  86  94  38  18  32  33   1  14  72  39  72  86  95   2  20  70 
C |   1  96   8   1   7   4  60   1  65  35  75  25   1  11   1   1   1  60   9   1 
G |  68   2  67  13   7   1   1  10   3   9   5  53   8  50   1  13   3  17  40   1 
T |  19   1   1   1   1   1   1  72   1  24  20   8  19   1  27   1   1  20  30  28 
Position weight matrix (PWM)
A | -0.90 -3.47 -0.29  0.98  0.99  1.08  0.17 -0.58  0.00  0.03 -3.47 -0.83  0.81  0.20  0.81  0.99  1.09 -2.77 -0.47  0.78 
C | -2.89  1.67 -0.81 -2.89 -0.94 -1.50  1.20 -2.89  1.28  0.66  1.43  0.33 -2.89 -0.49 -2.89 -2.89 -2.89  1.20 -0.69 -2.89 
G |  1.33 -2.20  1.31 -0.33 -0.94 -2.89 -2.89 -0.59 -1.79 -0.69 -1.28  1.08 -0.81  1.02 -2.89 -0.33 -1.79 -0.06  0.80 -2.89 
T | -0.52 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47  0.81 -3.47 -0.29 -0.47 -1.39 -0.52 -3.47 -0.17 -3.47 -3.47 -0.47 -0.06 -0.10 
STE12_UFoat et. al.P = 1.47e-29View matrix ↘
Sequence logo for STE12_U
Fisher’s P-value1.47e-29
Information content9.746
Max PWM score8.82
Recommended cutoff7.22
Position frequency matrix (PFM)
A | 0.51 0.49 0.01 0.97 0.97 0.01 0.01 0.01 
C | 0.03 0.11 0.01 0.01 0.01 0.01 0.01 0.39 
G | 0.39 0.39 0.97 0.01 0.01 0.01 0.81 0.12 
T | 0.08 0.01 0.01 0.01 0.01 0.97 0.17 0.49 
Position count matrix (PCM)
A |  51  49   1  97  97   1   1   1 
C |   3  11   1   1   1   1   1  39 
G |  39  39  97   1   1   1  81  12 
T |   8   1   1   1   1  97  17  49 
Position weight matrix (PWM)
A |  0.47  0.43 -3.47  1.11  1.11 -3.47 -3.47 -3.47 
C | -1.79 -0.49 -2.89 -2.89 -2.89 -2.89 -2.89  0.77 
G |  0.77  0.77  1.68 -2.89 -2.89 -2.89  1.50 -0.41 
T | -1.39 -3.47 -3.47 -3.47 -3.47  1.11 -0.63  0.43 
STE12_VFoat et. al.P = 4.57e-29View matrix ↘
Sequence logo for STE12_V
Fisher’s P-value4.57e-29
Information content9.568
Max PWM score8.78
Recommended cutoff7.73
Position frequency matrix (PFM)
A | 0.52 0.45 0.05 0.97 0.97 0.01 0.01 0.01 
C | 0.04 0.07 0.01 0.01 0.01 0.01 0.01 0.34 
G | 0.35 0.48 0.93 0.01 0.01 0.01 0.83 0.12 
T | 0.10 0.01 0.01 0.01 0.01 0.97 0.16 0.52 
Position count matrix (PCM)
A |  52  45   5  97  97   1   1   1 
C |   4   7   1   1   1   1   1  34 
G |  35  48  93   1   1   1  83  12 
T |  10   1   1   1   1  97  16  52 
Position weight matrix (PWM)
A |  0.49  0.34 -1.86  1.11  1.11 -3.47 -3.47 -3.47 
C | -1.50 -0.94 -2.89 -2.89 -2.89 -2.89 -2.89  0.64 
G |  0.66  0.98  1.64 -2.89 -2.89 -2.89  1.53 -0.41 
T | -1.16 -3.47 -3.47 -3.47 -3.47  1.11 -0.69  0.49 
STE12_WFoat et. al.P = 9.52e-05View matrix ↘
Sequence logo for STE12_W
Fisher’s P-value9.52e-05
Information content18.13
Max PWM score16.4
Recommended cutoff8.51
Position frequency matrix (PFM)
A | 0.31 0.37 0.01 0.01 0.01 0.61 0.10 0.01 0.01 0.01 0.01 0.02 0.01 0.82 
C | 0.01 0.30 0.01 0.44 0.03 0.17 0.35 0.29 0.01 0.01 0.95 0.04 0.95 0.01 
G | 0.20 0.33 0.97 0.55 0.95 0.01 0.54 0.01 0.95 0.54 0.03 0.71 0.01 0.16 
T | 0.48 0.01 0.01 0.01 0.01 0.21 0.01 0.70 0.02 0.45 0.01 0.23 0.03 0.01 
Position count matrix (PCM)
A |  31  37   1   1   1  61  10   1   1   1   1   2   1  82 
C |   1  30   1  44   3  17  35  28   1   1  95   4  95   1 
G |  20  33  97  55  95   1  54   1  95  54   3  71   1  16 
T |  48   1   1   1   1  21   1  70   2  45   1  23   3   1 
Position weight matrix (PWM)
A | -0.03  0.15 -3.47 -3.47 -3.47  0.65 -1.16 -3.47 -3.47 -3.47 -3.47 -2.77 -3.47  0.94 
C | -2.89  0.51 -2.89  0.89 -1.79 -0.06  0.66  0.48 -2.89 -2.89  1.66 -1.50  1.66 -2.89 
G |  0.11  0.61  1.68  1.12  1.66 -2.89  1.10 -2.89  1.66  1.10 -1.79  1.37 -2.89 -0.12 
T |  0.41 -3.47 -3.47 -3.47 -3.47 -0.42 -3.47  0.78 -2.77  0.34 -3.47 -0.33 -2.37 -3.47 
STE12_XFoat et. al.P = 0.0001762View matrix ↘
Sequence logo for STE12_X
Fisher’s P-value0.0001762
Information content15.14
Max PWM score14.28
Recommended cutoff7.75
Position frequency matrix (PFM)
A | 0.97 0.96 0.02 0.01 0.09 0.02 0.01 0.06 0.85 0.28 0.53 0.01 
C | 0.01 0.01 0.15 0.01 0.67 0.01 0.01 0.83 0.09 0.03 0.43 0.97 
G | 0.01 0.01 0.22 0.81 0.01 0.01 0.01 0.10 0.03 0.69 0.02 0.01 
T | 0.02 0.02 0.61 0.18 0.23 0.96 0.97 0.01 0.03 0.01 0.02 0.01 
Position count matrix (PCM)
A |  97  96   2   1   9   2   1   6  85  28  53   1 
C |   1   1  15   1  67   1   1  83   9   3  43  97 
G |   1   1  22  81   1   1   1  10   3  69   2   1 
T |   2   2  61  18  23  96  97   1   3   1   2   1 
Position weight matrix (PWM)
A |  1.11  1.10 -2.77 -3.47 -1.27 -2.77 -3.47 -1.67  0.98 -0.13  0.50 -3.47 
C | -2.89 -2.89 -0.18 -2.89  1.31 -2.89 -2.89  1.53 -0.69 -1.79  0.87  1.68 
G | -2.89 -2.89  0.20  1.50 -2.89 -2.89 -2.89 -0.59 -1.79  1.34 -2.20 -2.89 
T | -2.77 -2.77  0.65 -0.58 -0.33  1.10  1.11 -3.47 -2.37 -3.47 -2.77 -3.47 
STE12_YFoat et. al.P = 2.15e-06View matrix ↘
Sequence logo for STE12_Y
Fisher’s P-value2.15e-06
Information content15.78
Max PWM score14.15
Recommended cutoff10.08
Position frequency matrix (PFM)
A | 0.74 0.07 0.01 0.01 0.01 0.02 0.01 0.01 0.38 0.01 0.93 0.35 
C | 0.25 0.91 0.07 0.01 0.03 0.01 0.20 0.97 0.60 0.01 0.05 0.15 
G | 0.01 0.01 0.01 0.97 0.04 0.01 0.01 0.01 0.01 0.46 0.01 0.50 
T | 0.01 0.01 0.91 0.01 0.92 0.96 0.78 0.02 0.01 0.53 0.01 0.01 
Position count matrix (PCM)
A |  74   7   1   1   1   2   1   1  38   1  93  35 
C |  25  91   7   1   3   1  20  97  60   1   5  15 
G |   1   1   1  97   4   1   1   1   1  46   1  50 
T |   1   1  91   1  92  96  78   2   1  53   1   1 
Position weight matrix (PWM)
A |  0.84 -1.52 -3.47 -3.47 -3.47 -2.77 -3.47 -3.47  0.17 -3.47  1.07  0.09 
C |  0.33  1.62 -0.94 -2.89 -1.79 -2.89  0.11  1.68  1.20 -2.89 -1.28 -0.18 
G | -2.89 -2.89 -2.89  1.68 -1.50 -2.89 -2.89 -2.89 -2.89  0.94 -2.89  1.02 
T | -3.47 -3.47  1.05 -3.47  1.06  1.10  0.89 -2.77 -3.47  0.50 -3.47 -3.47 
STE12_ZFoat et. al.P = 1.05e-07View matrix ↘
Sequence logo for STE12_Z
Fisher’s P-value1.05e-07
Information content15.32
Max PWM score14.04
Recommended cutoff8.94
Position frequency matrix (PFM)
A | 0.14 0.78 0.13 0.01 0.02 0.01 0.01 0.01 0.97 0.01 0.81 0.50 
C | 0.84 0.01 0.15 0.01 0.01 0.01 0.01 0.90 0.01 0.68 0.15 0.49 
G | 0.02 0.01 0.04 0.97 0.01 0.03 0.10 0.09 0.01 0.28 0.04 0.01 
T | 0.01 0.20 0.67 0.01 0.96 0.95 0.89 0.01 0.01 0.03 0.01 0.01 
Position count matrix (PCM)
A |  14  78  13   1   2   1   1   1  97   1  81  50 
C |  84   1  15   1   1   1   1  90   1  68  15  49 
G |   2   1   4  97   1   3  10   9   1  28   4   1 
T |   1  20  67   1  96  95  89   1   1   3   1   1 
Position weight matrix (PWM)
A | -0.83  0.89 -0.90 -3.47 -2.77 -3.47 -3.47 -3.47  1.11 -3.47  0.93  0.45 
C |  1.54 -2.89 -0.18 -2.89 -2.89 -2.89 -2.89  1.61 -2.89  1.33 -0.18  1.00 
G | -2.20 -2.89 -1.50  1.68 -2.89 -1.79 -0.59 -0.69 -2.89  0.44 -1.50 -2.89 
T | -3.47 -0.47  0.74 -3.47  1.10  1.09  1.02 -3.47 -3.47 -2.37 -3.47 -3.47 
STE12Harbison et. al.P = 2.08e-25View matrix ↘
Sequence logo for STE12
Fisher’s P-value2.08e-25
Information content7.51
Max PWM score7.86
Recommended cutoff6.99
Position frequency matrix (PFM)
A | 0.076 0.130 0.855 0.876 0.923 0.027 0.692 
C | 0.075 0.052 0.044 0.030 0.008 0.919 0.052 
G | 0.040 0.790 0.036 0.052 0.033 0.006 0.163 
T | 0.809 0.029 0.065 0.041 0.036 0.047 0.094 
Position count matrix (PCM)
A |   7  13  85  87  92   2  69 
C |   7   5   4   3   0  91   5 
G |   4  79   3   5   3   0  16 
T |  80   2   6   4   3   4   9 
Position weight matrix (PWM)
A | -1.44 -0.90  0.98  1.01  1.06 -2.47  0.77 
C | -0.88 -1.24 -1.41 -1.79 -3.11  1.63 -1.24 
G | -1.50  1.48 -1.61 -1.24 -1.70 -3.40 -0.10 
T |  0.93 -2.40 -1.59 -2.05 -2.18 -1.92 -1.23 
STE12Macisaac et. alP = 2.08e-25View matrix ↘
Sequence logo for STE12
Fisher’s P-value2.08e-25
Information content8.494
Max PWM score8.04
Recommended cutoff7.26
Position frequency matrix (PFM)
A | 0.079 0.058 0.923 0.929 0.962 0.031 0.686 
C | 0.102 0.027 0.004 0.014 0.001 0.887 0.030 
G | 0.076 0.908 0.031 0.036 0.036 0.013 0.177 
T | 0.743 0.007 0.042 0.021 0.001 0.069 0.107 
Position count matrix (PCM)
A |   7   5  92  92  96   3  68 
C |  10   2   0   1   0  88   3 
G |   7  90   3   3   3   1  17 
T |  74   0   4   2   0   6  10 
Position weight matrix (PWM)
A | -1.40 -1.71  1.06  1.07  1.10 -2.33  0.76 
C | -0.57 -1.90 -3.81 -2.55 -5.19  1.59 -1.79 
G | -0.86  1.62 -1.76 -1.61 -1.61 -2.63 -0.02 
T |  0.84 -3.82 -2.03 -2.72 -5.77 -1.53 -1.10 
STE12_APachkov et alP = 4.15e-25View matrix ↘
Sequence logo for STE12_A
Fisher’s P-value4.15e-25
Information content9.837
Max PWM score8.07
Recommended cutoff7.99
Position frequency matrix (PFM)
A | 0.001 0.150 0.955 0.898 1.000 0.004 0.511 
C | 0.115 0.001 0.001 0.006 0.001 0.993 0.100 
G | 0.003 0.843 0.045 0.096 0.001 0.001 0.313 
T | 0.882 0.007 0.001 0.001 0.001 0.003 0.076 
Position count matrix (PCM)
A |   0  15  95  89 100   0  51 
C |  11   0   0   0   0  99  10 
G |   0  84   4   9   0   0  31 
T |  88   0   0   0   0   0   7 
Position weight matrix (PWM)
A | -5.77 -0.76  1.09  1.03  1.14 -4.38  0.47 
C | -0.45 -5.19 -5.19 -3.40 -5.19  1.71 -0.59 
G | -4.09  1.54 -1.39 -0.63 -5.19 -5.19  0.55 
T |  1.01 -3.82 -5.77 -5.77 -5.77 -4.67 -1.44 
STE12_BPachkov et alP = 3.10e-19View matrix ↘
Sequence logo for STE12_B
Fisher’s P-value3.10e-19
Information content8.543
Max PWM score7.32
Recommended cutoff6.65
Position frequency matrix (PFM)
A | 0.251 0.089 0.042 0.001 0.001 0.001 0.005 
C | 0.127 0.290 0.005 0.001 0.003 0.032 0.752 
G | 0.248 0.074 0.944 0.001 0.003 0.001 0.001 
T | 0.374 0.546 0.008 1.000 0.994 0.968 0.243 
Position count matrix (PCM)
A |  25   8   4   0   0   0   0 
C |  12  28   0   0   0   3  75 
G |  24   7  94   0   0   0   0 
T |  37  54   0 100  99  96  24 
Position weight matrix (PWM)
A | -0.24 -1.28 -2.03 -5.77 -5.77 -5.77 -4.16 
C | -0.35  0.48 -3.58 -5.19 -4.09 -1.73  1.43 
G |  0.32 -0.89  1.66 -5.19 -4.09 -5.19 -5.19 
T |  0.16  0.53 -3.69  1.14  1.13  1.11 -0.28 
STE12Zhu J and MQ ZhangP = 1View matrix ↘
Sequence logo for STE12
Fisher’s P-value1
Information content2.673
Max PWM score6.31
Recommended cutoff5.31
Position frequency matrix (PFM)
A | 0.62 0.12 0.12 0.62 0.62 0.62 0.25 0.25 
C | 0.12 0.12 0.12 0.12 0.12 0.12 0.50 0.38 
G | 0.12 0.12 0.62 0.12 0.12 0.12 0.12 0.12 
T | 0.12 0.62 0.12 0.12 0.12 0.12 0.12 0.25 
Position count matrix (PCM)
A |  62  12  12  62  62  62  25  25 
C |  12  12  12  12  12  12  50  38 
G |  12  12  62  12  12  12  12  12 
T |  12  62  12  12  12  12  12  25 
Position weight matrix (PWM)
A |  0.66 -0.98 -0.98  0.66  0.66  0.66 -0.25 -0.25 
C | -0.41 -0.41 -0.41 -0.41 -0.41 -0.41  1.02  0.75 
G | -0.41 -0.41  1.24 -0.41 -0.41 -0.41 -0.41 -0.41 
T | -0.98  0.66 -0.98 -0.98 -0.98 -0.98 -0.98 -0.25 
03 / EXPERIMENTAL CONTEXT

Gene-level annotations and interactions.

Genes bound in ChIP-chip experiments 130 genes

YAL002W, YAL028W, YAL029C, YAR014C, YAR015W, YAR027W, YBL004W, YBL016W, YBL017C, YBR011C, YBR083W, YCL027W, YCL055W, YCL056C, YCR017C, YCR018C-A, YCR019W, YCR026C, YCR027C, YCR089W, YDL013W, YDL127W, YDL128W, YDR042C, YDR085C, YDR098C-A, YDR098C-B, YDR169C, YDR210W, YDR240C, YDR281C, YDR309C, YDR316W-A, YDR316W-B, YDR317W, YDR417C, YDR419W, YDR461W, YER159C-A, YER160C, YFL026W, YFL027C, YFL039C, YFL049W, YFL050C, YFR023W, YGL032C, YGL050W, YGL062W, YGL067W, YGL069C, YGR013W, YGR014W, YGR038C-A, YGR038C-B, YGR163W, YGR164W, YGR189C, YGR218W, YGR221C, YHL009W-A, YHL009W-B, YHR005C, YHR072W, YHR072W-A, YHR079C, YHR082C, YHR083W, YHR084W, YIL015W, YIL036W, YIL037C, YIL082W, YIL083C, YIL123W, YJL060W, YJL148W, YJL186W, YJL187C, YKL095W, YKL096W, YKL189W, YKL209C, YKL220C, YKR040C, YKR041W, YKR042W, YKR089C, YKR090W, YKR091W, YLR105C, YLR452C, YML046W, YML047C, YML068W, YML124C, YMR013C, YMR065W, YMR119W, YMR119W-A, YMR197C, YMR198W, YMR199W, YMR204C, YMR232W, YNL025C, YNL043C, YNL145W, YNL192W, YNL279W, YNL280C, YNL289W, YNL331C, YNR044W, YOR048C, YOR086C, YOR092W, YOR236W, YOR246C, YOR247W, YOR248W, YOR343C, YOR343C-A, YOR343C-B, YPL146C, YPL156C, YPL192C, YPL198W, YPR002C-A, YPR135W

Genes affected by TF deletion 1 genes

No Data

Predicted TF–TF partners 1 genes

LYS14

Explore 1 original interaction plots →