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STB3
YDR169C
Ribosomal RNA processing element (RRPE)-binding protein involved in the glucose-induced transition from quiescence to growth; restricted to nucleus in quiescent cells, released into cytoplasm after glucose repletion; binds Sin3p
01 / RECOMMENDED MATRIX
Best-performing DNA-binding model.
Fisher’s P-valueNo data
Information content13.08
Max PWM score15.36
Recommended cutoff11.54
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.10 0.17 0.18 0.19 0.51 0.55 0.78 0.50 0.10 0.05 0.01 0.01 0.01 0.01 0.96 0.15 0.13 C | 0.17 0.17 0.42 0.38 0.06 0.12 0.04 0.03 0.01 0.01 0.01 0.01 0.06 0.97 0.01 0.59 0.12 G | 0.55 0.20 0.06 0.11 0.19 0.15 0.07 0.03 0.01 0.01 0.01 0.02 0.02 0.01 0.03 0.08 0.14 T | 0.19 0.46 0.34 0.32 0.24 0.18 0.12 0.44 0.88 0.93 0.97 0.96 0.91 0.01 0.01 0.18 0.61
Position count matrix (PCM)
A | 10 17 18 19 51 55 78 50 10 5 1 1 1 1 96 15 13 C | 17 17 42 38 6 12 4 3 1 1 1 1 6 97 1 59 12 G | 55 20 6 11 19 15 7 3 1 1 1 2 2 1 3 8 14 T | 19 46 34 32 24 18 12 44 88 93 97 96 91 1 1 18 61
Position weight matrix (PWM)
A | -1.16 -0.63 -0.58 -0.52 0.47 0.54 0.89 0.45 -1.16 -1.86 -3.47 -3.47 -3.47 -3.47 1.10 -0.76 -0.90 C | -0.06 -0.06 0.85 0.75 -1.10 -0.41 -1.50 -1.79 -2.89 -2.89 -2.89 -2.89 -1.10 1.68 -2.89 1.19 -0.41 G | 1.12 0.11 -1.10 -0.49 0.05 -0.18 -0.94 -1.79 -2.89 -2.89 -2.89 -2.20 -2.20 -2.89 -1.79 -0.81 -0.25 T | -0.52 0.36 0.06 0.00 -0.29 -0.58 -0.98 0.32 1.01 1.07 1.11 1.10 1.05 -3.47 -3.47 -0.58 0.65
02 / COMPARATIVE BENCHMARKS
Alternative candidate matrices 0
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
No additional matrices in the original archive.
03 / EXPERIMENTAL CONTEXT
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 1 genes
No Data
Genes affected by TF deletion 15 genes
YNL017C, YPL016W, YPR138C, YLL034C, YBR093C, YFR006W, YOR298W, YDR169C, YAR071W, YHL028W, YIL162W, YJR096W, YDR175C, YMR117C, YNL138W
Predicted TF–TF partners 12 genes
ABF1, DOT6, EDS1, GCN4, MBP1, REB1, STB1, STB2, SWI4, SWI6, TOD6, XBP1