STB2
YMR053C
Protein that interacts with Sin3p in a two-hybrid assay and is part of a large protein complex with Sin3p and Stb1p
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.029 0.001 0.001 0.001 0.059 0.939 0.852 0.353 C | 0.941 0.001 0.264 0.001 0.088 0.001 0.059 0.265 G | 0.001 0.997 0.734 0.939 0.001 0.001 0.088 0.235 T | 0.029 0.001 0.001 0.059 0.852 0.059 0.001 0.147
A | 2 0 0 0 5 93 85 35 C | 94 0 26 0 8 0 5 26 G | 0 99 73 93 0 0 8 23 T | 2 0 0 5 85 5 0 14
A | -2.40 -5.77 -5.77 -5.77 -1.69 1.08 0.98 0.10 C | 1.65 -5.19 0.38 -5.19 -0.72 -5.19 -1.12 0.39 G | -5.19 1.71 1.41 1.65 -5.19 -5.19 -0.72 0.27 T | -2.40 -5.77 -5.77 -1.69 0.98 -1.69 -5.77 -0.78
Alternative candidate matrices 1
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
STB2Foat et. al.P = 0.003054View matrix ↘
A | 0.01 0.06 0.81 0.56 0.04 0.96 0.31 0.55 0.26 0.08 0.09 0.97 0.30 0.22 0.01 0.70 C | 0.14 0.88 0.04 0.02 0.03 0.03 0.04 0.33 0.60 0.05 0.01 0.01 0.01 0.01 0.01 0.06 G | 0.65 0.01 0.01 0.09 0.01 0.01 0.01 0.11 0.01 0.63 0.13 0.01 0.03 0.47 0.93 0.01 T | 0.20 0.05 0.14 0.32 0.92 0.01 0.65 0.01 0.13 0.24 0.77 0.01 0.67 0.31 0.05 0.24
A | 1 6 81 56 4 96 31 55 26 8 9 97 30 22 1 70 C | 14 88 4 2 3 3 4 33 60 5 1 1 1 1 1 6 G | 65 1 1 9 1 1 1 11 1 63 13 1 3 47 93 1 T | 20 5 14 32 92 1 65 1 13 24 77 1 67 31 5 24
A | -3.47 -1.67 0.93 0.56 -2.08 1.10 -0.03 0.54 -0.21 -1.39 -1.27 1.11 -0.06 -0.37 -3.47 0.78 C | -0.25 1.59 -1.50 -2.20 -1.79 -1.79 -1.50 0.61 1.20 -1.28 -2.89 -2.89 -2.89 -2.89 -2.89 -1.10 G | 1.28 -2.89 -2.89 -0.69 -2.89 -2.89 -2.89 -0.49 -2.89 1.25 -0.33 -2.89 -1.79 0.96 1.64 -2.89 T | -0.47 -1.86 -0.83 0.00 1.06 -3.47 0.71 -3.47 -0.90 -0.29 0.88 -3.47 0.74 -0.03 -1.86 -0.29
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 142 genes
YAL016W, YAL062W, YAR009C, YBR109C, YBR110W, YBR185C, YBR186W, YBR204C, YBR205W, YBR206W, YBR214W, YCL002C, YCL006C, YCL007C, YCL008C, YCL009C, YCL010C, YCR002C, YCR004C, YCR005C, YCR006C, YCR008W, YCR012W, YDL091C, YDL092W, YDL094C, YDL108W, YDL109C, YDL224C, YDR056C, YDR057W, YDR075W, YDR080W, YDR136C, YDR138W, YDR151C, YDR152W, YDR210W-C, YDR210W-D, YDR276C, YDR279W, YDR286C, YDR287W, YDR318W, YDR322W, YDR370C, YDR371W, YEL076W-C, YEL077C, YER044C, YER134C, YER138C, YER189W, YER190W, YFL066C, YFL067W, YFR007W, YGR038C-A, YGR126W, YGR184C, YGR187C, YGR188C, YHL021C, YHL050C, YHR028C, YHR041C, YHR042W, YIL048W, YIL075C, YIL100W, YIL101C, YIL136W, YIL137C, YJR010C-A, YJR088C, YJR089W, YJR098C, YJR099W, YJR108W, YKL009W, YKL010C, YKL071W, YKL177W, YKL179C, YKR003W, YKR065C, YKR094C, YKR095W, YLL014W, YLL015W, YLR023C, YLR083C, YLR092W, YLR199C, YLR200W, YLR269C, YLR271W, YLR373C, YLR375W, YLR412W, YLR418C, YLR419W, YLR428C, YLR430W, YML002W, YML072C, YMR043W, YMR125W, YMR283C, YNL021W, YNL022C, YNL129W, YNL130C, YNL136W, YNL137C, YNL210W, YNL211C, YNR028W, YNR054C, YOL042W, YOL043C, YOL083W, YOR023C, YOR024W, YOR025W, YOR115C, YOR263C, YOR265W, YOR323C, YOR325W, YOR353C, YOR365C, YOR367W, YOR368W, YPL150W, YPL151C, YPL194W, YPL204W, YPL206C, YPR095C, YPR118W, YPR204W
Genes affected by TF deletion 72 genes
YER147C, YJR052W, YDR222W, YKR076W, YDR247W, YDR189W, YPL014W, YDR494W, YFL013W-A, YKL014C, YJR149W, YOL136C, YGR250C, YML027W, YMR288W, YJL099W, YLL002W, YMR104C, YNL116W, YDR279W, YLR183C, YPL077C, YCR021C, YKL051W, YKL082C, YER152C, YMR023C, YJR148W, YDL133W, YJL088W, YLR438W, YMR199W, YLR348C, YMR145C, YBR265W, YFL021W, YIR035C, YLR375W, YLR349W, YOR354C, YER064C, YNL312W, YNL065W, YOL058W, YOL002C, YGL055W, YGR138C, YLR416C, YNL289W, YHR007C, YMR054W, YGR139W, YPL061W, YDL048C, YHR037W, YIR019C, YOR367W, YFL023W, YPR061C, YBR054W, YHR018C, YLR297W, YBR217W, YBR021W, YBR055C, YIL135C, YIL137C, YMR034C, YLR049C, YMR181C, YMR276W, YOL101C
Genes supported by both experiments 4 genes
YDR279W, YIL137C, YLR375W, YOR367W
Predicted TF–TF partners 5 genes
MBP1, STB1, STB3, SWI4, SWI6