SPT23
YKL020C
ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Mga2p; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.594 0.988 0.883 0.835 0.029 0.004 0.677 0.965 C | 0.001 0.001 0.001 0.001 0.129 0.464 0.132 0.001 G | 0.404 0.010 0.084 0.001 0.002 0.230 0.070 0.033 T | 0.001 0.001 0.032 0.163 0.840 0.301 0.121 0.001
A | 59 98 88 83 2 0 67 96 C | 0 0 0 0 12 46 13 0 G | 40 1 8 0 0 23 7 3 T | 0 0 3 16 84 30 12 0
A | 0.62 1.13 1.02 0.96 -2.40 -4.38 0.75 1.10 C | -5.19 -5.19 -5.19 -5.19 -0.33 0.95 -0.31 -5.19 G | 0.81 -2.89 -0.76 -5.19 -4.50 0.25 -0.94 -1.70 T | -5.77 -5.77 -2.30 -0.67 0.97 -0.06 -0.97 -5.77
Alternative candidate matrices 2
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
SPT23Foat et. al.P = 1View matrix ↘
A | 0.65 0.85 0.08 0.01 0.01 0.01 0.49 0.13 0.36 0.42 0.13 0.46 0.44 0.02 0.24 0.01 0.01 0.97 0.47 0.27 0.19 C | 0.12 0.01 0.44 0.01 0.01 0.01 0.44 0.63 0.33 0.01 0.16 0.01 0.04 0.17 0.38 0.01 0.02 0.01 0.25 0.14 0.79 G | 0.22 0.05 0.19 0.97 0.97 0.05 0.07 0.10 0.31 0.57 0.01 0.10 0.29 0.34 0.11 0.96 0.01 0.01 0.15 0.27 0.01 T | 0.01 0.09 0.29 0.01 0.01 0.93 0.01 0.14 0.01 0.01 0.70 0.43 0.23 0.46 0.27 0.02 0.97 0.01 0.13 0.32 0.01
A | 65 85 8 1 1 1 49 13 36 42 13 46 44 2 24 1 1 97 47 27 19 C | 12 1 44 1 1 1 44 63 33 1 16 1 4 17 38 1 2 1 25 14 79 G | 22 5 19 97 97 5 7 10 31 56 1 10 28 34 11 96 1 1 15 27 1 T | 1 9 28 1 1 93 1 14 1 1 70 43 23 46 27 2 97 1 13 32 1
A | 0.71 0.98 -1.39 -3.47 -3.47 -3.47 0.43 -0.90 0.12 0.27 -0.90 0.36 0.32 -2.77 -0.29 -3.47 -3.47 1.11 0.38 -0.17 -0.52 C | -0.41 -2.89 0.89 -2.89 -2.89 -2.89 0.89 1.25 0.61 -2.89 -0.12 -2.89 -1.50 -0.06 0.75 -2.89 -2.20 -2.89 0.33 -0.25 1.48 G | 0.20 -1.28 0.05 1.68 1.68 -1.28 -0.94 -0.59 0.54 1.15 -2.89 -0.59 0.48 0.64 -0.49 1.67 -2.89 -2.89 -0.18 0.41 -2.89 T | -3.47 -1.27 -0.10 -3.47 -3.47 1.07 -3.47 -0.83 -3.47 -3.47 0.78 0.30 -0.33 0.36 -0.17 -2.77 1.11 -3.47 -0.90 0.00 -3.47
SPT23Harbison et. al.P = 9.86e-07View matrix ↘
A | 0.595 0.989 0.883 0.835 0.029 0.004 0.678 0.966 C | 0.001 0.001 0.001 0.001 0.129 0.464 0.132 0.001 G | 0.404 0.010 0.084 0.001 0.002 0.230 0.070 0.033 T | 0.001 0.001 0.032 0.163 0.839 0.302 0.121 0.001
A | 59 98 88 83 2 0 67 96 C | 0 0 0 0 12 46 13 0 G | 40 1 8 0 0 23 7 3 T | 0 0 3 16 83 30 12 0
A | 0.62 1.13 1.02 0.96 -2.40 -4.38 0.75 1.10 C | -5.19 -5.19 -5.19 -5.19 -0.33 0.95 -0.31 -5.19 G | 0.81 -2.89 -0.76 -5.19 -4.50 0.25 -0.94 -1.70 T | -5.77 -5.77 -2.30 -0.67 0.96 -0.06 -0.97 -5.77
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 86 genes
YAR050W, YBL008W, YBR099C, YBR167C, YBR168W, YBR229C, YCR018C-A, YCR019W, YCR096C, YDL068W, YDL071C, YDL146W, YDR034C-A, YDR040C, YDR041W, YDR042C, YDR084C, YDR086C, YDR144C, YDR145W, YDR210W-D, YDR245W, YDR261C, YDR278C, YDR322C-A, YDR323C, YDR473C, YDR495C, YDR520C, YER002W, YER044C-A, YER135C, YER189W, YER190W, YFR002W, YGL001C, YGR071C, YGR072W, YGR218W, YGR273C, YHR004C, YHR043C, YHR085W, YHR182W, YIR005W, YJL030W, YJL031C, YJL175W, YJL191W, YJL192C, YJL203W, YJL204C, YJR011C, YJR037W, YJR051W, YKL169C, YKL177W, YKL179C, YKR004C, YKR009C, YLR011W, YLR023C, YLR047C, YLR048W, YML031W, YMR125W, YMR178W, YMR193W, YMR194W, YMR258C, YNL001W, YNL002C, YNL050C, YOL003C, YOL079W, YOL115W, YOL159C, YOL160W, YOR058C, YOR148C, YPL051W, YPL199C, YPL216W, YPL217C, YPR104C, YPR135W
Genes affected by TF deletion 39 genes
YKL020C, YGL039W, YKL043W, YOR377W, YPL021W, YJR116W, YBR067C, YIR033W, YDR275W, YIL124W, YNR071C, YOR074C, YJR151C, YOR357C, YBR101C, YOR298C-A, YNL310C, YKR024C, YNL065W, YDR210W, YOL032W, YDR209C, YJL038C, YKL001C, YOR367W, YMR300C, YNR047W, YPL126W, YKL114C, YDR274C, YOR027W, YGL255W, YBR244W, YMR246W, YPL012W, YDL025C, YIL042C, YOL101C, YOR340C
Predicted TF–TF partners 1 genes
FZF1