PPR1
YLR014C
Zinc finger transcription factor containing a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of genes involved in uracil biosynthesis; activity may be modulated by interaction with Tup1p
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.05 0.01 0.57 0.97 0.93 0.01 0.01 0.35 0.01 0.01 0.01 0.29 0.08 0.01 C | 0.01 0.01 0.01 0.01 0.02 0.01 0.35 0.33 0.97 0.01 0.89 0.01 0.01 0.01 G | 0.01 0.10 0.42 0.01 0.01 0.97 0.01 0.01 0.01 0.01 0.01 0.48 0.23 0.80 T | 0.93 0.89 0.01 0.01 0.03 0.01 0.63 0.31 0.01 0.97 0.09 0.22 0.68 0.18
A | 5 1 56 97 93 1 1 35 1 1 1 28 8 1 C | 1 1 1 1 2 1 35 33 97 1 89 1 1 1 G | 1 10 42 1 1 97 1 1 1 1 1 48 23 80 T | 93 89 1 1 3 1 63 31 1 97 9 22 68 18
A | -1.86 -3.47 0.58 1.11 1.07 -3.47 -3.47 0.09 -3.47 -3.47 -3.47 -0.10 -1.39 -3.47 C | -2.89 -2.89 -2.89 -2.89 -2.20 -2.89 0.66 0.61 1.68 -2.89 1.60 -2.89 -2.89 -2.89 G | -2.89 -0.59 0.85 -2.89 -2.89 1.68 -2.89 -2.89 -2.89 -2.89 -2.89 0.98 0.25 1.49 T | 1.07 1.02 -3.47 -3.47 -2.37 -3.47 0.68 -0.03 -3.47 1.11 -1.27 -0.37 0.75 -0.58
Alternative candidate matrices 1
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
PPR1Morozov et. al.P = 0.5151View matrix ↘
A | 0.013 0.013 0.031 0.043 0.507 0.255 0.747 0.810 0.013 0.244 0.081 0.054 0.013 0.546 C | 0.115 0.936 0.023 0.031 0.407 0.247 0.101 0.061 0.145 0.250 0.877 0.872 0.110 0.185 G | 0.021 0.039 0.740 0.897 0.065 0.468 0.123 0.013 0.294 0.377 0.029 0.021 0.865 0.249 T | 0.851 0.013 0.207 0.029 0.021 0.030 0.029 0.116 0.548 0.129 0.013 0.053 0.013 0.020
A | 1 1 3 4 50 25 74 81 1 24 8 5 1 54 C | 11 93 2 3 40 24 10 6 14 25 87 87 11 18 G | 2 3 74 89 6 46 12 1 29 37 2 2 86 24 T | 85 1 20 2 2 3 2 11 54 12 1 5 1 2
A | -3.20 -3.20 -2.33 -2.01 0.46 -0.23 0.85 0.93 -3.20 -0.27 -1.37 -1.78 -3.20 0.53 C | -0.45 1.65 -2.06 -1.76 0.82 0.32 -0.58 -1.08 -0.22 0.33 1.58 1.58 -0.49 0.03 G | -2.15 -1.53 1.41 1.61 -1.02 0.96 -0.38 -2.63 0.49 0.74 -1.83 -2.15 1.57 0.32 T | 0.98 -3.20 -0.44 -2.40 -2.72 -2.37 -2.40 -1.01 0.54 -0.91 -3.20 -1.80 -3.20 -2.77
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 106 genes
YAL060W, YBL018C, YBL068W, YBL070C, YBR065C, YBR109C, YBR110W, YBR127C, YBR214W, YCR039C, YCR040W, YCR041W, YDL054C, YDL092W, YDL094C, YDL141W, YDL142C, YDL156W, YDL157C, YDL158C, YDL159W, YDL160C, YDL175C, YDR020C, YDR021W, YDR028C, YDR029W, YDR048C, YDR061W, YDR084C, YDR136C, YDR138W, YDR142C, YDR183W, YDR294C, YDR375C, YDR376W, YDR440W, YEL010W, YER008C, YER009W, YER022W, YFR001W, YGL130W, YGL131C, YGL134W, YGL143C, YGL144C, YGR145W, YGR177C, YGR188C, YGR225W, YGR261C, YHR164C, YIL038C, YIL161W, YJL023C, YJL145W, YJL179W, YJL180C, YJL203W, YJL204C, YKL145W, YKL147C, YKL202W, YKL203C, YKR014C, YKR022C, YKR023W, YKR035C, YKR051W, YLR239C, YLR240W, YLR288C, YLR289W, YLR418C, YLR419W, YLR429W, YML077W, YMR060C, YMR061W, YMR126C, YNL009W, YNL111C, YNL247W, YNL248C, YNL299W, YNL321W, YNL322C, YNL323W, YNL325C, YNR054C, YOL083W, YOL095C, YOR021C, YOR040W, YOR090C, YOR091W, YOR093C, YOR094W, YOR112W, YOR296W, YPL129W, YPR049C, YPR051W, YPR081C
Genes affected by TF deletion 54 genes
YGR278W, YHL014C, YML114C, YHR146W, YDR207C, YMR042W, YOR226C, YPL177C, YKL170W, YMR314W, YBR093C, YBR129C, YMR102C, YDR281C, YER029C, YKL142W, YKL206C, YLR119W, YOR132W, YBR044C, YLR257W, YNL088W, YAR015W, YGR132C, YJL123C, YLR438C-A, YOR075W, YKR080W, YFR041C, YLR099C, YGL153W, YOL144W, YBL060W, YHR215W, YGR012W, YOL143C, YAR071W, YPR167C, YIL130W, YLR420W, YNL289W, YGR137W, YKL030W, YKL001C, YOL126C, YLR014C, YKL216W, YDR088C, YHR200W, YBR244W, YHR135C, YLR079W, YPL040C, YGR089W