← All factors / TF RECORD

PIP2

YOR363C, OAF2

View at SGD ↗

Autoregulatory oleate-specific transcriptional activator of peroxisome proliferation, contains Zn(2)-Cys(6) cluster domain, forms heterodimer with Oaf1p, binds oleate response elements (OREs), activates beta-oxidation genes

01 / RECOMMENDED MATRIX

Best-performing DNA-binding model.

RecommendedSource: Foat et. al.
Fisher’s P-value0.01377
Information content18.85
Max PWM score19.37
Recommended cutoff11.51
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.01 0.18 0.01 0.96 0.97 0.30 0.37 0.05 0.06 0.03 0.46 0.17 0.01 0.01 0.01 0.36 0.53 0.12 
C | 0.35 0.34 0.97 0.01 0.01 0.01 0.31 0.81 0.28 0.73 0.50 0.01 0.01 0.97 0.96 0.10 0.01 0.01 
G | 0.43 0.19 0.01 0.02 0.01 0.09 0.02 0.13 0.36 0.13 0.01 0.60 0.97 0.01 0.01 0.03 0.34 0.43 
T | 0.22 0.29 0.01 0.01 0.01 0.60 0.30 0.01 0.30 0.11 0.03 0.22 0.01 0.01 0.02 0.51 0.12 0.45 
Position count matrix (PCM)
A |   1  18   1  96  97  30  37   5   6   3  46  17   1   1   1  36  53  12 
C |  35  34  97   1   1   1  31  81  28  73  50   1   1  97  96  10   1   1 
G |  43  19   1   2   1   9   2  13  36  13   1  60  97   1   1   3  34  43 
T |  22  28   1   1   1  60  30   1  30  11   3  22   1   1   2  51  12  45 
Position weight matrix (PWM)
A | -3.47 -0.58 -3.47  1.10  1.11 -0.06  0.15 -1.86 -1.67 -2.37  0.36 -0.63 -3.47 -3.47 -3.47  0.12  0.50 -0.98 
C |  0.66  0.64  1.68 -2.89 -2.89 -2.89  0.54  1.50  0.44  1.40  1.02 -2.89 -2.89  1.68  1.67 -0.59 -2.89 -2.89 
G |  0.87  0.05 -2.89 -2.20 -2.89 -0.69 -2.20 -0.33  0.69 -0.33 -2.89  1.20  1.68 -2.89 -2.89 -1.79  0.64  0.87 
T | -0.37 -0.10 -3.47 -3.47 -3.47  0.63 -0.06 -3.47 -0.06 -1.07 -2.37 -0.37 -3.47 -3.47 -2.77  0.47 -0.98  0.34 
02 / COMPARATIVE BENCHMARKS

Alternative candidate matrices 1

Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.

PIP2Morozov et. al.P = 1View matrix ↘
Sequence logo for PIP2
Fisher’s P-value1
Information content10.02
Max PWM score19.42
Recommended cutoff14.75
Position frequency matrix (PFM)
A | 0.030 0.058 0.047 0.300 0.121 0.276 0.263 0.079 0.274 0.200 0.247 0.232 0.250 0.164 0.257 0.237 0.262 0.149 0.274 0.194 0.216 0.057 0.591 
C | 0.702 0.124 0.279 0.222 0.519 0.316 0.249 0.444 0.094 0.412 0.217 0.402 0.134 0.424 0.354 0.328 0.104 0.502 0.112 0.495 0.388 0.052 0.194 
G | 0.209 0.692 0.629 0.205 0.271 0.171 0.219 0.193 0.084 0.217 0.177 0.106 0.473 0.199 0.229 0.189 0.509 0.192 0.438 0.265 0.293 0.879 0.117 
T | 0.060 0.126 0.045 0.272 0.089 0.237 0.269 0.284 0.549 0.171 0.359 0.261 0.143 0.212 0.161 0.246 0.125 0.157 0.176 0.047 0.103 0.011 0.098 
Position count matrix (PCM)
A |   3   5   4  30  12  27  26   7  27  20  24  23  25  16  25  23  26  14  27  19  21   5  59 
C |  70  12  27  22  51  31  24  44   9  41  21  40  13  42  35  32  10  50  11  49  38   5  19 
G |  20  69  62  20  27  17  21  19   8  21  17  10  47  19  22  18  50  19  43  26  29  87  11 
T |   6  12   4  27   8  23  26  28  54  17  35  26  14  21  16  24  12  15  17   4  10   1   9 
Position weight matrix (PWM)
A | -2.37 -1.71 -1.92 -0.06 -0.97 -0.15 -0.20 -1.40 -0.16 -0.47 -0.26 -0.32 -0.25 -0.67 -0.22 -0.30 -0.20 -0.76 -0.16 -0.50 -0.39 -1.73  0.61 
C |  1.36 -0.37  0.44  0.21  1.06  0.56  0.32  0.90 -0.65  0.83  0.19  0.80 -0.30  0.86  0.68  0.60 -0.55  1.03 -0.47  1.01  0.77 -1.24  0.07 
G |  0.15  1.35  1.25  0.13  0.41 -0.05  0.20  0.07 -0.76  0.19 -0.02 -0.53  0.97  0.10  0.24  0.05  1.04  0.06  0.89  0.39  0.49  1.59 -0.43 
T | -1.67 -0.93 -1.96 -0.16 -1.28 -0.30 -0.17 -0.12  0.54 -0.63  0.12 -0.20 -0.81 -0.41 -0.69 -0.26 -0.94 -0.71 -0.60 -1.92 -1.13 -3.37 -1.18 
03 / EXPERIMENTAL CONTEXT

Gene-level annotations and interactions.

Genes bound in ChIP-chip experiments 111 genes

YAL016W, YAL034W-A, YAL035W, YAL036C, YAR066W, YBL089W, YBR019C, YBR020W, YBR048W, YBR127C, YBR150C, YBR151W, YBR187W, YBR214W, YCL068C, YCR081W, YCR106W, YDL058W, YDL059C, YDL123W, YDR048C, YDR142C, YDR207C, YDR208W, YDR210W-D, YDR256C, YDR312W, YEL011W, YEL054C, YER015W, YER049W, YER138C, YFR015C, YGL143C, YGL172W, YGL173C, YGL201C, YGL235W, YGL237C, YGR109C, YGR109W-A, YGR109W-B, YGR145W, YGR177C, YGR188C, YHL017W, YHL021C, YHR041C, YHR042W, YHR117W, YHR171W, YIL014W, YIL069C, YIL100W, YIL101C, YIL113W, YIL114C, YIL120W, YIL125W, YJL023C, YJL148W, YJL222W, YJR045C, YJR046W, YJR065C, YJR066W, YJR069C, YJR071W, YKL054C, YKL092C, YKL093W, YKL146W, YKL148C, YKL211C, YKR096W, YLR046C, YLR078C, YLR079W, YLR089C, YLR090W, YLR174W, YLR176C, YLR177W, YLR239C, YLR240W, YLR251W, YLR252W, YML006C, YML072C, YMR043W, YMR107W, YMR165C, YMR324C, YMR325W, YNL006W, YNL007C, YNL113W, YNL115C, YNL299W, YNL321W, YNL322C, YOL083W, YOR301W, YOR329C, YPL016W, YPL017C, YPL059W, YPL060C-A, YPL262W, YPL263C, YPR166C

Genes affected by TF deletion 631 genes

YBR002C, YBL090W, YCR012W, YCR040W, YCR016W, YDR064W, YER112W, YGR280C, YGR282C, YIL148W, YJR085C, YJR022W, YLR250W, YNL081C, YOR253W, YOR225W, YOR257W, YPL239W, YPL211W, YKL122C, YBR191W, YDL064W, YDL128W, YDL131W, YDR188W, YEL046C, YFR032C-A, YGL009C, YHR143W, YHR174W, YLR025W, YLR056W, YLR060W, YLR062C, YLR432W, YLR406C, YMR194W, YNL211C, YOR002W, YOR067C, YOR006C, YOR008C, YOR071C, YPL049C, YBR001C, YBR031W, YBL087C, YCR013C, YCR041W, YCR043C, YDR063W, YDR397C, YER117W, YER146W, YGL231C, YGR275W, YGR279C, YIL082W, YKR042W, YLR275W, YMR011W, YML115C, YMR015C, YOR252W, YOR192C, YOR224C, YOR226C, YCR097W-A, YAL034C, YAL069W, YBR190W, YDL061C, YFR035C, YGL012W, YGR155W, YGR157W, YHR142W, YHR143W-A, YHR147C, YJL052W, YLR089C, YLR028C, YLR061W, YLR435W, YLR466W, YMR221C, YMR193C-A, YMR225C, YNL244C, YOR066W, YBR062C, YCR082W, YDR096W, YDR164C, YDR529C, YDR500C, YFR005C, YGR063C, YHR081W, YHR053C, YHR025W, YHR055C, YIR034C, YJR143C, YJR147W, YJR149W, YLL028W, YLR340W, YLR372W, YLR374C, YMR071C, YMR134W, YNL147W, YNL149C, YOL136C, YOL142W, YOR285W, YOR287C, YOR317W, YOR347C, YOR321W, YOR351C, YPR050C, YPR020W, YPR052C, YPL036W, YPL187W, YAR064W, YAR068W, YBL027W, YBL059W, YBR283C, YBR253W, YCL017C, YDR339C, YER086W, YGL103W, YGL077C, YGR180C, YGR182C, YHR208W, YIL016W, YIL052C, YKL137W, YML023C, YML056C, YML085C, YML029W, YMR286W, YMR256C, YNR026C, YNL307C, YNR032C-A, YOR103C, YPL142C, YPL144W, YHR183W, YBR091C, YBR067C, YDR461W, YDR493W, YFR006W, YGR030C, YGR034W, YGR064W, YHR021C, YJR146W, YJR117W, YLL029W, YKR106W, YLR304C, YLR339C, YMR074C, YNL110C, YNL176C, YNL114C, YNL146W, YNL178W, YOL077W-A, YOL109W, YOR286W, YPR013C, YPL271W, YNL251C, YNL287W, YAR062W, YBL026W, YBR282W, YBR252W, YBR254C, YCL018W, YBR256C, YDL191W, YDR281C, YER052C, YER025W, YER056C, YGL070C, YGL102C, YGR211W, YGR181W, YGR215W, YGR185C, YIL015W, YHR211W, YJL178C, YJL148W, YKL140W, YLR121C, YLR153C, YLR185W, YLR125W, YML024W, YML055W, YML084W, YML026C, YML057W, YML086C, YMR253C, YMR255W, YNL302C, YNL306W, YPL143W, YPL145C, YPL147W, YBL091C-A, YBR010W, YDR012W, YDR378C, YDR412W, YJR058C, YJR094W-A, YLR286C, YLR287C-A, YML123C, YMR022W, YNL030W, YOL019W, YOR265W, YOR203W, YPL183W-A, YPL247C, YAL041W, YAL043C, YBR197C, YBR169C, YDL133C-A, YDL136W, YDR224C, YER002W, YFR044C, YHR123W, YHR188C, YJL093C, YKL053C-A, YLR066W, YLR098C, YLR068W, YLR038C, YLR438C-A, YLR439W, YMR230W, YNL247W, YNL279W, YNL219C, YNL283C, YOR011W, YOR045W, YBL092W, YBR009C, YCL058C, YDR077W, YDR373W, YDR377W, YER154W, YGR285C, YIL153W, YIL123W, YOR234C, YPL184C, YPL249C-A, YJR148W, YLR200W, YAL010C, YAL012W, YAL016W, YAL045C, YBR162W-A, YBR194W, YBR196C, YDL075W, YDR225W, YDR261C, YJL122W, YKL081W, YKL116C, YLR034C, YLR065C, YMR171C, YOR008C-A, YOR014W, YOR078W, YDR502C, YFR011C, YGR037C, YGR011W, YJR151C, YLL009C, YLR344W, YLR348C, YMR139W, YOL144W, YOL146W, YOL086C, YOR293W, YOR327C, YOR357C, YOR329C, YBL062W, YBL003C, YDL232W, YGR254W, YHR214W, YKL209C, YKL178C, YMR260C, YNR037C, YPL092W, YJL062W, YDR139C, YDR471W, YFL017W-A, YHR032W, YJR121W, YLL010C, YLR343W, YLR379W, YLR349W, YMR138W, YMR081C, YMR112C, YNL150W, YNL184C, YOL143C, YOR322C, YPR053C, YPL279C, YOR221C, YBL028C, YAR075W, YBL032W, YBR262C, YDL229W, YGL080W, YGR189C, YHR213W, YHR214W-A, YHR216W, YIL027C, YJL184W, YJL188C, YJL158C, YKL175W, YKL146W, YKL177W, YML030W, YML094W, YML095C-A, YMR263W, YMR323W, YER060W, YCR023C, YDR086C, YDR450W, YER131W, YGL189C, YHR010W, YIL158W, YIL162W, YKR057W, YKR093W, YLR262C-A, YLR264W, YLR295C, YMR057C, YNL038W, YOL002C, YOR237W, YOR239W, YPL221W, YPL225W, YBR171W, YDR232W, YDR234W, YEL058W, YHR190W, YJL101C, YKL058W, YLR040C, YLR104W, YLR044C, YLR420W, YMR242C, YNL255C, YNL259C, YOR081C, YOR085W, YOR393W, YPL037C, YCL066W, YCR053W, YCR060W, YDR447C, YGL245W, YHR005C-A, YHL001W, YIL127C, YJR063W, YKR027W, YLR292C, YML126C, YNL066W, YOL026C, YOL030W, YOL061W, YOR270C, YOR210W, YAL022C, YDL141W, YDL081C, YDL083C, YFR049W, YGL056C, YGL028C, YGR109W-A, YKL120W, YLR041W, YLR043C, YML009C, YMR203W, YMR205C, YMR237W, YOR018W, YOR082C, YOR020C, YOR084W, YPL032C, YPL063W, YBR082C, YBR084C-A, YCR097W, YDR510W, YFL026W, YHR072W-A, YKL032C, YKL003C, YKL033W-A, YLR388W, YLR326W, YOL126C, YOR365C, YPR062W, YDL208W, YDR322C-A, YDR294C, YDR357C, YER043C, YGL087C, YGL089C, YGR260W, YHR219W, YIL032C, YIL004C, YIL036W, YLR170C, YLR204W, YNL321W, YBR109C, YBR145W, YCR090C, YDL045W-A, YDR115W, YFL023W, YFR020W, YGR020C, YIR016W, YJR131W, YLL014W, YLL018C, YLR325C, YNL190W, YNL162W, YOL121C, YOR330C, YPL281C, YBL006C, YBR268W, YCL035C, YGL088W, YJR004C, YJL166W, YKL216W, YKL156W, YLR167W, YNR044W, YNL322C, YBL107C, YDR056C, YDR454C, YDR396W, YGL191W, YIL138C, YJR104C, YJR046W, YLR303W, YMR035W, YMR006C, YMR037C, YOR277C, YOR247W, YAL033W, YER019C-A, YEL071W, YGL031C, YGR148C, YHR136C, YHR141C, YJL141C, YKL099C, YKL133C, YMR245W, YOR089C, YPL013C, YPL076W, YPR159W, YER012W, YBR053C, YCR028C-A, YCR003W, YCR071C, YGL255W, YIL169C, YIL171W, YJR077C, YKR094C, YLR237W, YLR300W, YLR302C, YMR003W, YNL070W, YNL045W, YOL040C, YOL071W, YOR276W, YOR248W, YOR282W, YBR210W, YBR244W, YDL121C, YGL030W, YGL032C, YGR118W, YJL136C, YKL069W, YLR047C, YLR051C, YLR083C, YLR421C, YMR215W, YNL268W, YPL071C, YPL010W, YCL004W, YBR090C, YFL034C-A, YFL067W, YFL037W, YGR085C, YGR027C, YIR020W-B, YIR022W, YJR135W-A, YKL006W, YKL008C, YLR394W, YLR332W, YOR307C, YOR369C, YOR375C, YPR074C, YPR044C, YOR034C, YCL007C, YDL184C, YER074W, YER048C, YIL008W, YIL040W, YJL173C, YKL164C, YKL196C, YLR180W, YML108W, YNR022C, YPL170W, YKL006C-A, YLR022C, YLR395C, YLR333C, YMR123W, YNL138W, YOL127W, YOL159C, YOR306C, YOR312C, YPR073C, YPR043W, YBL018C, YDR328C, YDR305C, YER073W, YER048W-A, YGR209C, YIL069C, YKL160W, YLR147C, YLR177W, YML077W, YML079W, YML081C-A, YOR182C

Genes supported by both experiments 11 genes

YAL016W, YGR109W-A, YIL069C, YJL148W, YJR046W, YKL146W, YLR089C, YLR177W, YNL321W, YNL322C, YOR329C