MET28
YIR017C
Basic leucine zipper (bZIP) transcriptional activator in the Cbf1p-Met4p-Met28p complex, participates in the regulation of sulfur metabolism
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.193 0.092 0.266 0.415 0.097 0.046 0.061 0.052 0.734 0.061 C | 0.116 0.098 0.120 0.042 0.750 0.097 0.055 0.561 0.024 0.456 G | 0.124 0.024 0.462 0.384 0.102 0.816 0.070 0.144 0.040 0.145 T | 0.568 0.786 0.152 0.159 0.051 0.041 0.815 0.242 0.202 0.338
A | 19 9 26 41 9 4 6 5 73 6 C | 11 9 12 4 75 9 5 56 2 45 G | 12 2 46 38 10 81 7 14 4 14 T | 56 78 15 15 5 4 81 24 20 33
A | -0.51 -1.25 -0.18 0.26 -1.19 -1.94 -1.66 -1.82 0.83 -1.66 C | -0.44 -0.61 -0.41 -1.46 1.43 -0.62 -1.19 1.14 -2.01 0.93 G | -0.37 -2.01 0.94 0.76 -0.57 1.51 -0.94 -0.22 -1.50 -0.22 T | 0.57 0.90 -0.74 -0.70 -1.84 -2.05 0.93 -0.28 -0.46 0.05
Alternative candidate matrices 4
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
MET28_AFoat et. al.P = 1View matrix ↘
A | 0.41 0.23 0.22 0.29 0.52 0.48 0.19 0.24 0.27 0.21 0.81 0.01 0.15 0.23 0.77 C | 0.02 0.31 0.10 0.01 0.14 0.01 0.38 0.22 0.15 0.01 0.01 0.01 0.01 0.01 0.01 G | 0.13 0.01 0.15 0.01 0.22 0.01 0.01 0.25 0.34 0.01 0.01 0.01 0.49 0.46 0.01 T | 0.44 0.46 0.53 0.69 0.12 0.51 0.43 0.28 0.24 0.77 0.18 0.97 0.36 0.30 0.22
A | 41 23 22 28 52 48 19 24 27 21 81 1 15 23 77 C | 2 31 10 1 14 1 38 22 15 1 1 1 1 1 1 G | 13 1 15 1 22 1 1 25 34 1 1 1 49 46 1 T | 44 46 53 69 12 51 43 28 24 77 18 97 36 30 22
A | 0.25 -0.33 -0.37 -0.10 0.49 0.41 -0.52 -0.29 -0.17 -0.42 0.93 -3.47 -0.76 -0.33 0.88 C | -2.20 0.54 -0.59 -2.89 -0.25 -2.89 0.75 0.20 -0.18 -2.89 -2.89 -2.89 -2.89 -2.89 -2.89 G | -0.33 -2.89 -0.18 -2.89 0.20 -2.89 -2.89 0.33 0.64 -2.89 -2.89 -2.89 1.00 0.94 -2.89 T | 0.32 0.36 0.50 0.77 -0.98 0.47 0.30 -0.13 -0.29 0.88 -0.58 1.11 0.12 -0.06 -0.37
MET28_BFoat et. al.P = 0.001414View matrix ↘
A | 0.97 0.02 0.43 0.64 0.01 0.01 0.40 0.29 0.47 0.01 0.01 0.97 0.40 0.06 0.91 C | 0.01 0.07 0.01 0.01 0.01 0.54 0.10 0.02 0.26 0.96 0.97 0.01 0.42 0.26 0.01 G | 0.01 0.82 0.56 0.07 0.97 0.03 0.01 0.01 0.27 0.01 0.01 0.01 0.01 0.24 0.01 T | 0.01 0.09 0.01 0.28 0.01 0.42 0.49 0.68 0.01 0.02 0.01 0.01 0.18 0.44 0.07
A | 97 2 43 64 1 1 40 28 47 1 1 97 40 6 91 C | 1 7 1 1 1 54 10 2 26 96 97 1 42 26 1 G | 1 82 56 7 97 3 1 1 27 1 1 1 1 24 1 T | 1 9 1 28 1 42 49 68 1 2 1 1 18 44 7
A | 1.11 -2.77 0.30 0.69 -3.47 -3.47 0.22 -0.10 0.38 -3.47 -3.47 1.11 0.22 -1.67 1.05 C | -2.89 -0.94 -2.89 -2.89 -2.89 1.10 -0.59 -2.20 0.37 1.67 1.68 -2.89 0.85 0.37 -2.89 G | -2.89 1.52 1.13 -0.94 1.68 -1.79 -2.89 -2.89 0.41 -2.89 -2.89 -2.89 -2.89 0.29 -2.89 T | -3.47 -1.27 -3.47 -0.13 -3.47 0.27 0.43 0.75 -3.47 -2.77 -3.47 -3.47 -0.58 0.32 -1.52
MET28Macisaac et. alP = 0.2365View matrix ↘
A | 0.012 0.012 0.012 0.012 0.012 0.012 C | 0.964 0.012 0.012 0.012 0.012 0.012 G | 0.012 0.012 0.964 0.012 0.964 0.964 T | 0.012 0.964 0.012 0.964 0.012 0.012
A | 1 1 1 1 1 1 C | 96 1 1 1 1 1 G | 1 1 96 1 96 96 T | 1 96 1 96 1 1
A | -3.28 -3.28 -3.28 -3.28 -3.28 -3.28 C | 1.68 -2.71 -2.71 -2.71 -2.71 -2.71 G | -2.71 -2.71 1.68 -2.71 1.68 1.68 T | -3.28 1.10 -3.28 1.10 -3.28 -3.28
MET28_BMorozov et. al.P = 0.1508View matrix ↘
A | 0.222 0.106 0.559 0.057 0.082 0.044 0.106 C | 0.195 0.722 0.199 0.789 0.083 0.045 0.188 G | 0.065 0.120 0.168 0.050 0.749 0.040 0.582 T | 0.518 0.052 0.074 0.104 0.087 0.871 0.124
A | 22 10 55 5 8 4 10 C | 19 72 19 78 8 4 18 G | 6 12 16 5 74 4 58 T | 51 5 7 10 8 87 12
A | -0.37 -1.10 0.56 -1.73 -1.36 -1.98 -1.10 C | 0.08 1.39 0.10 1.48 -0.77 -1.39 0.04 G | -1.02 -0.41 -0.07 -1.28 1.43 -1.50 1.17 T | 0.48 -1.82 -1.46 -1.12 -1.30 1.00 -0.95
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 80 genes
YBR122C, YBR124W, YCR081W, YDL050C, YDL089W, YDL090C, YDL149W, YDL151C, YDL192W, YDR030C, YDR031W, YDR048C, YDR098C-A, YDR098C-B, YDR113C, YDR115W, YDR144C, YDR145W, YDR317W, YDR443C, YDR444W, YEL010W, YER087W, YER118C, YER120W, YGR076C, YGR145W, YGR156W, YGR188C, YGR218W, YIL038C, YIL085C, YIL086C, YIL087C, YIL161W, YJR007W, YJR069C, YJR071W, YKL014C, YKL075C, YKL076C, YKL221W, YKL222C, YKR051W, YKR083C, YLR023C, YLR047C, YLR048W, YLR064W, YLR067C, YLR068W, YLR239C, YLR240W, YMR098C, YMR126C, YMR178W, YMR211W, YMR238W, YMR270C, YNL009W, YNL038W, YNL082W, YNL141W, YNL210W, YNL211C, YOL003C, YOL049W, YOL050C, YOL076W, YOL077C, YOL093W, YOL094C, YOR021C, YOR124C, YOR249C, YOR339C, YPL041C, YPL043W, YPR047W, YPR056W
Genes affected by TF deletion 32 genes
YLR216C, YFR033C, YBR093C, YBR129C, YBL058W, YDR281C, YKL142W, YLR183C, YOR011W, YLR099C, YOR074C, YOR298C-A, YDR344C, YNL310C, YNR005C, YNL065W, YDL146W, YDR204W, YDR206W, YGL055W, YNL289W, YDR209C, YPL061W, YKL001C, YML099C, YLR297W, YOR027W, YGL255W, YMR034C, YJL076W, YDL029W, YOL101C
Predicted TF–TF partners 7 genes
MBP1, STB1, STB5, SUM1, SUT1, SWI4, SWI6