HMS1
YOR032C
Basic helix-loop-helix (bHLH) protein with similarity to myc-family transcription factors; overexpression confers hyperfilamentous growth and suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.067 0.089 0.021 0.065 0.143 0.193 0.049 0.140 0.589 0.183 C | 0.168 0.087 0.211 0.024 0.112 0.144 0.053 0.058 0.146 0.021 G | 0.708 0.247 0.692 0.820 0.437 0.617 0.094 0.598 0.015 0.209 T | 0.056 0.577 0.075 0.091 0.308 0.045 0.804 0.204 0.251 0.587
A | 6 8 2 6 14 19 4 14 58 18 C | 16 8 21 2 11 14 5 5 14 2 G | 70 24 69 82 43 61 9 59 1 20 T | 5 57 7 9 30 4 80 20 25 58
A | -1.56 -1.28 -2.72 -1.59 -0.81 -0.51 -1.88 -0.83 0.61 -0.56 C | -0.07 -0.73 0.16 -2.01 -0.47 -0.22 -1.22 -1.13 -0.21 -2.15 G | 1.37 0.32 1.35 1.52 0.89 1.23 -0.65 1.20 -2.48 0.15 T | -1.74 0.59 -1.45 -1.26 -0.04 -1.96 0.92 -0.45 -0.24 0.61
Alternative candidate matrices 2
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
HMS1Foat et. al.P = 0.2301View matrix ↘
A | 0.57 0.01 0.68 0.01 0.01 0.01 0.97 0.19 0.56 0.40 C | 0.21 0.89 0.25 0.96 0.75 0.96 0.01 0.17 0.42 0.22 G | 0.01 0.01 0.06 0.01 0.01 0.02 0.01 0.42 0.01 0.01 T | 0.21 0.09 0.01 0.02 0.24 0.01 0.01 0.21 0.01 0.38
A | 56 1 68 1 1 1 97 19 56 40 C | 21 89 25 96 75 96 1 17 42 22 G | 1 1 6 1 1 2 1 42 1 1 T | 21 9 1 2 24 1 1 21 1 38
A | 0.58 -3.47 0.75 -3.47 -3.47 -3.47 1.11 -0.52 0.56 0.22 C | 0.15 1.60 0.33 1.67 1.43 1.67 -2.89 -0.06 0.85 0.20 G | -2.89 -2.89 -1.10 -2.89 -2.89 -2.20 -2.89 0.85 -2.89 -2.89 T | -0.42 -1.27 -3.47 -2.77 -0.29 -3.47 -3.47 -0.42 -3.47 0.17
HMS1_BMorozov et. al.P = 0.6917View matrix ↘
A | 0.068 0.747 0.031 0.022 0.056 0.435 C | 0.725 0.056 0.737 0.069 0.170 0.379 G | 0.077 0.151 0.158 0.881 0.055 0.120 T | 0.130 0.046 0.073 0.028 0.718 0.066
A | 6 74 3 2 5 43 C | 72 5 73 6 17 37 G | 7 15 15 88 5 12 T | 13 4 7 2 71 6
A | -1.55 0.85 -2.33 -2.68 -1.74 0.31 C | 1.39 -1.17 1.41 -0.96 -0.06 0.74 G | -0.85 -0.18 -0.13 1.59 -1.19 -0.41 T | -0.90 -1.94 -1.48 -2.44 0.81 -1.58
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 58 genes
YBR099C, YBR133C, YBR135W, YBR160W, YBR178W, YBR190W, YBR191W, YBR195C, YCR018C-A, YCR019W, YCR024C, YDL068W, YDL071C, YDL146W, YDL184C, YDL228C, YDR022C, YDR042C, YDR048C, YDR064W, YDR065W, YDR098C-A, YDR098C-B, YDR259C, YDR522C, YEL002C, YEL047C, YEL050C, YER007C-A, YER136W, YGL001C, YGL077C, YGL100W, YGL101W, YGL102C, YGL134W, YGR024C, YGR027C, YHR001W-A, YIR020C, YJL006C, YJL191W, YJL192C, YJR139C, YKL043W, YLR027C, YLR029C, YLR030W, YLR043C, YLR105C, YLR334C, YLR368W, YLR379W, YLR440C, YMR194W, YOR102W, YOR154W, YPL198W
Genes affected by TF deletion 368 genes
YCR040W, YDR432W, YGR280C, YGR282C, YIL148W, YJR085C, YKR012C, YOR225W, YOR257W, YKL122C, YDL131W, YDR188W, YDR192C, YFR032C-A, YGL009C, YLR056W, YLR060W, YLR062C, YLR432W, YLR406C, YMR194W, YNL239W, YNL211C, YOR008C, YPL049C, YBR031W, YBL087C, YCR013C, YCR041W, YDR063W, YER117W, YGR279C, YKR042W, YKR013W, YNL078W, YOR190W, YOR252W, YOR226C, YCR097W-A, YAL069W, YBR220C, YBR222C, YDL061C, YDR187C, YGR155W, YHR142W, YHR143W-A, YJL052W, YLR089C, YLR028C, YLR061W, YMR221C, YMR225C, YNL244C, YOR032C, YOR066W, YPL048W, YCR073W-A, YDR096W, YDR158W, YDR464W, YFR005C, YGR063C, YHR053C, YHR025W, YHR055C, YIR034C, YJR143C, YJR116W, YLR372W, YMR071C, YNL147W, YNL149C, YOR285W, YOR321W, YOR351C, YPR020W, YPL187W, YAR068W, YBR283C, YGL103W, YGR180C, YHR208W, YIL016W, YML056C, YML085C, YML029W, YMR286W, YMR256C, YNL307C, YPL142C, YHR183W, YBR091C, YBR067C, YDR461W, YGR030C, YGR034W, YHR021C, YJR117W, YLR339C, YMR074C, YNL110C, YNL176C, YNL114C, YNL146W, YOL077W-A, YOL109W, YPL271W, YNL251C, YBL026W, YBR282W, YCL018W, YDL191W, YDR281C, YGL070C, YGL102C, YGR211W, YGR181W, YGR215W, YGR185C, YIL015W, YKL169C, YLR185W, YLR125W, YML055W, YML084W, YML026C, YML086C, YPL143W, YPL145C, YPL147W, YDR012W, YDR378C, YIL156W, YJR094W-A, YLR287C-A, YNL058C, YNL030W, YOL019W, YOR229W, YOR265W, YPL183W-A, YPL247C, YKL025C, YDL133C-A, YDL136W, YDR224C, YFR044C, YHR123W, YHR188C, YLR066W, YLR068W, YLR439W, YMR230W, YNL279W, YOR045W, YBR009C, YCR045C, YER154W, YGR285C, YIL153W, YKR048C, YNL057W, YOR234C, YJR148W, YAL010C, YAL012W, YAL042W, YAL043C-A, YAL016W, YBR162W-A, YBR196C, YDL075W, YDR261C, YKL081W, YOR008C-A, YGR037C, YLR344W, YLR380W, YMR139W, YOL144W, YOL086C, YOR293W, YOR327C, YOR357C, YOR329C, YPR054W, YJL159W, YKL209C, YKL178C, YMR260C, YPL092W, YCR088W, YDR471W, YLR343W, YLR379W, YMR112C, YMR083W, YNL150W, YNL152W, YOL143C, YNR043W, YBL028C, YBL032W, YBR262C, YCL027W, YIL027C, YJL188C, YJL158C, YKL175W, YKL177W, YML030W, YDR086C, YER131W, YGL189C, YHR010W, YHL032C, YIL158W, YKR057W, YKR093W, YLR264W, YPL225W, YBR171W, YDR234W, YEL058W, YHR190W, YKL058W, YLR040C, YNL259C, YOR085W, YOR023C, YOR393W, YPL031C, YPL066W, YCL066W, YCR053W, YDR447C, YGL245W, YHR005C-A, YIL127C, YJR063W, YML126C, YNL066W, YNL037C, YOR210W, YDL081C, YGL056C, YKL120W, YLR041W, YLR043C, YML009C, YMR237W, YOR018W, YOR020C, YPL063W, YCR097W, YFL026W, YGR077C, YHR072W-A, YKL003C, YLR354C, YLR388W, YOL126C, YPR062W, YPR036W, YDR322C-A, YDR294C, YDR357C, YER043C, YGL089C, YGR202C, YGR234W, YIL036W, YMR326C, YBR145W, YDL045W-A, YGR044C, YIR016W, YLL018C, YLR325C, YNL162W, YPL281C, YBR268W, YJR004C, YKL216W, YKL156W, YLR167W, YNR044W, YNL322C, YDR056C, YDR454C, YDR396W, YGL191W, YGL226W, YHL004W, YLR303W, YMR006C, YMR037C, YOR277C, YOR247W, YPL262W, YAL033W, YDL118W, YER019C-A, YGL031C, YGR148C, YHR136C, YHR141C, YMR245W, YNL263C, YOR063W, YCR028C-A, YKR094C, YLR237W, YLR300W, YLR302C, YMR003W, YNL070W, YNL074C, YNL045W, YOR248W, YBR244W, YDL121C, YGL030W, YFR057W, YGL032C, YGR118W, YHR135C, YJL136C, YKL069W, YLR051C, YLR421C, YMR215W, YBR090C, YFL034C-A, YFL037W, YGR085C, YGR027C, YJR135W-A, YKL006W, YLR332W, YLR396C, YLR334C, YNL169C, YOR369C, YPR044C, YCL007C, YDL184C, YIL008W, YKL164C, YKL196C, YLR180W, YML108W, YLR022C, YLR333C, YOL127W, YOR312C, YPR043W, YBL018C, YDR305C, YER048W-A, YGR209C, YKL160W, YLR147C, YLR177W, YML077W, YML081C-A, YOR182C
Genes supported by both experiments 7 genes
YDL184C, YGL102C, YGR027C, YLR043C, YLR334C, YLR379W, YMR194W
Predicted TF–TF partners 5 genes
CBF1, MIG1, NHP10, RSF2, SUT1