HAP5
YOR358W
Subunit of the heme-activated, glucose-repressed Hap2/3/4/5 CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.146 0.046 0.025 0.181 0.386 0.029 0.021 0.001 0.118 1.000 0.001 0.001 0.093 0.085 0.001 C | 0.213 0.443 0.333 0.249 0.308 0.144 0.696 0.159 0.288 0.001 0.001 0.001 0.001 0.117 0.381 G | 0.235 0.488 0.547 0.471 0.093 0.288 0.147 0.001 0.419 0.001 0.001 0.056 0.907 0.736 0.001 T | 0.407 0.022 0.095 0.099 0.213 0.540 0.136 0.841 0.175 0.001 1.000 0.944 0.001 0.062 0.619
A | 14 4 2 18 38 2 2 0 11 100 0 0 9 8 0 C | 21 44 33 24 30 14 69 15 28 0 0 0 0 11 38 G | 23 48 54 47 9 28 14 0 41 0 0 5 90 73 0 T | 40 2 9 9 21 54 13 84 17 0 100 94 0 6 61
A | -0.78 -1.94 -2.55 -0.57 0.19 -2.40 -2.72 -5.77 -1.00 1.14 -5.77 -5.77 -1.24 -1.33 -5.77 C | 0.17 0.90 0.62 0.32 0.54 -0.22 1.35 -0.12 0.47 -5.19 -5.19 -5.19 -5.19 -0.43 0.75 G | 0.27 1.00 1.11 0.96 -0.66 0.47 -0.20 -5.19 0.84 -5.19 -5.19 -1.17 1.62 1.41 -5.19 T | 0.24 -2.68 -1.21 -1.17 -0.41 0.52 -0.86 0.97 -0.60 -5.77 1.14 1.08 -5.77 -1.64 0.66
Alternative candidate matrices 4
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
HAP5_AFoat et. al.P = 0.007186View matrix ↘
A | 0.17 0.21 0.01 0.53 0.97 0.97 0.97 0.38 0.56 0.29 0.37 C | 0.46 0.51 0.01 0.01 0.01 0.01 0.01 0.46 0.19 0.25 0.41 G | 0.36 0.20 0.97 0.46 0.01 0.01 0.01 0.14 0.25 0.20 0.03 T | 0.01 0.08 0.01 0.01 0.01 0.01 0.01 0.02 0.01 0.26 0.19
A | 17 21 1 53 97 97 97 38 56 28 37 C | 46 51 1 1 1 1 1 46 19 25 41 G | 36 20 97 46 1 1 1 14 25 20 3 T | 1 8 1 1 1 1 1 2 1 26 19
A | -0.63 -0.42 -3.47 0.50 1.11 1.11 1.11 0.17 0.56 -0.10 0.15 C | 0.94 1.04 -2.89 -2.89 -2.89 -2.89 -2.89 0.94 0.05 0.33 0.82 G | 0.69 0.11 1.68 0.94 -2.89 -2.89 -2.89 -0.25 0.33 0.11 -1.79 T | -3.47 -1.39 -3.47 -3.47 -3.47 -3.47 -3.47 -2.77 -3.47 -0.21 -0.52
HAP5_BFoat et. al.P = 0.02613View matrix ↘
A | 0.01 0.73 0.68 0.87 0.01 0.01 0.82 0.03 0.02 0.78 0.86 0.01 0.25 C | 0.01 0.01 0.01 0.12 0.08 0.87 0.16 0.01 0.94 0.01 0.01 0.18 0.01 G | 0.03 0.01 0.30 0.01 0.90 0.12 0.01 0.02 0.01 0.07 0.05 0.01 0.26 T | 0.95 0.26 0.01 0.01 0.01 0.01 0.01 0.94 0.04 0.14 0.08 0.80 0.49
A | 1 73 68 87 1 1 82 3 2 78 86 1 25 C | 1 1 1 12 8 87 16 1 94 1 1 18 1 G | 3 1 30 1 90 12 1 2 1 7 5 1 26 T | 95 26 1 1 1 1 1 94 4 14 8 80 49
A | -3.47 0.82 0.75 1.00 -3.47 -3.47 0.94 -2.37 -2.77 0.89 0.99 -3.47 -0.25 C | -2.89 -2.89 -2.89 -0.41 -0.81 1.58 -0.12 -2.89 1.65 -2.89 -2.89 0.00 -2.89 G | -1.79 -2.89 0.51 -2.89 1.61 -0.41 -2.89 -2.20 -2.89 -0.94 -1.28 -2.89 0.37 T | 1.09 -0.21 -3.47 -3.47 -3.47 -3.47 -3.47 1.08 -2.08 -0.83 -1.39 0.92 0.43
HAP5Harbison et. al.P = 0.4836View matrix ↘
A | 0.012 0.012 0.965 0.965 0.012 C | 0.965 0.965 0.012 0.012 0.012 G | 0.012 0.012 0.012 0.012 0.012 T | 0.012 0.012 0.012 0.012 0.965
A | 1 1 96 96 1 C | 96 96 1 1 1 G | 1 1 1 1 1 T | 1 1 1 1 96
A | -3.28 -3.28 1.10 1.10 -3.28 C | 1.68 1.68 -2.71 -2.71 -2.71 G | -2.71 -2.71 -2.71 -2.71 -2.71 T | -3.28 -3.28 -3.28 -3.28 1.10
HAP5Macisaac et. alP = 0.4836View matrix ↘
A | 0.012 0.012 0.964 0.964 0.012 C | 0.964 0.964 0.012 0.012 0.012 G | 0.012 0.012 0.012 0.012 0.012 T | 0.012 0.012 0.012 0.012 0.964
A | 1 1 96 96 1 C | 96 96 1 1 1 G | 1 1 1 1 1 T | 1 1 1 1 96
A | -3.28 -3.28 1.10 1.10 -3.28 C | 1.68 1.68 -2.71 -2.71 -2.71 G | -2.71 -2.71 -2.71 -2.71 -2.71 T | -3.28 -3.28 -3.28 -3.28 1.10
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 47 genes
YBL074C, YBR012W-A, YBR012W-B, YBR099C, YBR128C, YBR167C, YBR168W, YCR018C-A, YCR019W, YCR054C, YCR076C, YDL013W, YDL152W, YDL170W, YDL171C, YDR048C, YDR142C, YDR210W-D, YDR245W, YDR495C, YDR503C, YDR522C, YEL050C, YER049W, YER174C, YGL001C, YGL132W, YGL187C, YGR024C, YGR263C, YGR265W, YHR011W, YHR051W, YJL003W, YJL004C, YLL027W, YLR105C, YLR168C, YLR169W, YLR171W, YLR220W, YLR435W, YMR194W, YNR050C, YOL091W, YOR005C, YPL207W
Genes affected by TF deletion 94 genes
YCR040W, YGL234W, YNL016W, YOR225W, YGL009C, YLR058C, YBR031W, YMR044W, YOR226C, YGR155W, YOR066W, YOR382W, YDR096W, YHR025W, YOR285W, YOR351C, YPL187W, YER026C, YGR180C, YHR208W, YML023C, YML058W-A, YNL335W, YBR067C, YCR077C, YDR461W, YNL146W, YPR015C, YCL018W, YBR256C, YIL015W, YNL332W, YPL145C, YDR012W, YIL154C, YLR286C, YAL013W, YDL070W, YGR099W, YJR094C, YAL012W, YLR034C, YLR438W, YMR171C, YNL220W, YBR070C, YJL026W, YLR348C, YDR320C, YJL153C, YKL178C, YLR343W, YLR349W, YBL032W, YCL027W, YKL177W, YKL148C, YMR323W, YMR057C, YOL058W, YLR040C, YOR393W, YCL066W, YKL120W, YLR041W, YPL032C, YFL026W, YMR120C, YOR305W, YOR383C, YGL089C, YGR234W, YLR136C, YNL190W, YPL281C, YPR035W, YER040W, YJR004C, YNR044W, YHL004W, YHR018C, YLR299W, YLR303W, YMR006C, YMR186W, YBR053C, YLR302C, YDL121C, YGL032C, YKL069W, YKL164C, YLR180W, YNR055C, YLR359W
Predicted TF–TF partners 2 genes
SKN7, SUT1