GCR1
YPL075W, LPF10
Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and functions with the transcriptional activator Gcr2p
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.136 0.055 0.041 0.103 0.029 0.029 0.029 0.566 0.166 C | 0.030 0.031 0.900 0.029 0.029 0.911 0.899 0.038 0.572 G | 0.805 0.828 0.030 0.029 0.029 0.031 0.043 0.034 0.096 T | 0.029 0.086 0.029 0.839 0.913 0.029 0.029 0.362 0.166
A | 13 5 4 10 2 2 2 56 16 C | 3 3 90 2 2 91 89 3 57 G | 80 82 3 2 2 3 4 3 9 T | 2 8 2 83 91 2 2 36 16
A | -0.86 -1.76 -2.05 -1.13 -2.40 -2.40 -2.40 0.57 -0.66 C | -1.79 -1.76 1.61 -1.83 -1.83 1.62 1.61 -1.56 1.16 G | 1.50 1.53 -1.79 -1.83 -1.83 -1.76 -1.43 -1.67 -0.63 T | -2.40 -1.31 -2.40 0.96 1.05 -2.40 -2.40 0.12 -0.66
Alternative candidate matrices 5
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
GCR1Foat et. al.P = 3.97e-07View matrix ↘
A | 0.44 0.51 0.17 0.01 0.01 0.90 0.93 0.01 0.02 0.01 0.04 0.25 C | 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.97 0.95 0.11 0.01 G | 0.47 0.48 0.01 0.97 0.95 0.01 0.01 0.55 0.01 0.01 0.72 0.27 T | 0.08 0.01 0.82 0.01 0.03 0.08 0.05 0.44 0.01 0.03 0.13 0.48
A | 44 51 17 1 1 90 93 1 2 1 4 25 C | 1 1 1 1 1 1 1 1 97 95 11 1 G | 47 48 1 97 95 1 1 55 1 1 72 27 T | 8 1 82 1 3 8 5 44 1 3 13 48
A | 0.32 0.47 -0.63 -3.47 -3.47 1.03 1.07 -3.47 -2.77 -3.47 -2.08 -0.25 C | -2.89 -2.89 -2.89 -2.89 -2.89 -2.89 -2.89 -2.89 1.68 1.66 -0.49 -2.89 G | 0.96 0.98 -2.89 1.68 1.66 -2.89 -2.89 1.12 -2.89 -2.89 1.39 0.41 T | -1.39 -3.47 0.94 -3.47 -2.37 -1.39 -1.86 0.32 -3.47 -2.37 -0.90 0.41
GCR1Harbison et. al.P = 3.16e-05View matrix ↘
A | 0.012 0.012 0.012 0.012 0.012 0.012 0.012 0.488 0.012 C | 0.012 0.012 0.964 0.012 0.012 0.964 0.964 0.012 0.964 G | 0.964 0.964 0.012 0.012 0.012 0.012 0.012 0.012 0.012 T | 0.012 0.012 0.012 0.965 0.965 0.012 0.012 0.488 0.012
A | 1 1 1 1 1 1 1 48 1 C | 1 1 96 1 1 96 96 1 96 G | 96 96 1 1 1 1 1 1 1 T | 1 1 1 96 96 1 1 48 1
A | -3.28 -3.28 -3.28 -3.28 -3.28 -3.28 -3.28 0.42 -3.28 C | -2.71 -2.71 1.68 -2.71 -2.71 1.68 1.68 -2.71 1.68 G | 1.68 1.68 -2.71 -2.71 -2.71 -2.71 -2.71 -2.71 -2.71 T | -3.28 -3.28 -3.28 1.10 1.10 -3.28 -3.28 0.42 -3.28
GCR1Macisaac et. alP = 6.38e-05View matrix ↘
A | 0.071 0.001 0.286 0.036 0.071 0.001 0.001 0.001 0.464 C | 0.179 0.036 0.001 0.962 0.036 0.001 0.962 0.997 0.143 G | 0.500 0.749 0.606 0.001 0.001 0.001 0.001 0.001 0.001 T | 0.250 0.214 0.107 0.001 0.892 0.997 0.036 0.001 0.393
A | 7 0 28 3 7 0 0 0 46 C | 17 3 0 96 3 0 96 99 14 G | 50 74 60 0 0 0 0 0 0 T | 25 21 10 0 89 99 3 0 39
A | -1.51 -5.77 -0.11 -2.18 -1.51 -5.77 -5.77 -5.77 0.37 C | -0.01 -1.61 -5.19 1.68 -1.61 -5.19 1.68 1.71 -0.23 G | 1.02 1.43 1.21 -5.19 -5.19 -5.19 -5.19 -5.19 -5.19 T | -0.25 -0.40 -1.10 -5.77 1.03 1.14 -2.18 -5.77 0.21
GCR1Pachkov et alP = 1.36e-06View matrix ↘
A | 0.271 0.001 0.001 1.000 0.876 0.004 0.222 0.001 C | 0.012 0.058 0.009 0.001 0.004 0.005 0.682 0.744 G | 0.029 0.942 0.991 0.001 0.001 0.942 0.001 0.006 T | 0.688 0.001 0.001 0.001 0.119 0.049 0.096 0.250
A | 27 0 0 100 87 0 22 0 C | 1 5 0 0 0 0 68 74 G | 2 94 99 0 0 94 0 0 T | 68 0 0 0 11 4 9 25
A | -0.17 -5.77 -5.77 1.14 1.01 -4.38 -0.37 -5.77 C | -2.71 -1.13 -3.00 -5.19 -3.81 -3.58 1.33 1.42 G | -1.83 1.66 1.71 -5.19 -5.19 1.66 -5.19 -3.40 T | 0.77 -5.77 -5.77 -5.77 -0.99 -1.88 -1.20 -0.25
GCR1Zhu J and MQ ZhangP = 0.1457View matrix ↘
A | 0.10 0.30 0.10 0.10 0.10 C | 0.70 0.10 0.10 0.70 0.70 G | 0.10 0.10 0.10 0.10 0.10 T | 0.10 0.50 0.70 0.10 0.10
A | 10 30 10 10 10 C | 70 10 10 70 70 G | 10 10 10 10 10 T | 10 50 70 10 10
A | -1.16 -0.06 -1.16 -1.16 -1.16 C | 1.36 -0.59 -0.59 1.36 1.36 G | -0.59 -0.59 -0.59 -0.59 -0.59 T | -1.16 0.45 0.78 -1.16 -1.16
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 63 genes
YAL004W, YAL038W, YBL074C, YBL107W-A, YBR025C, YBR032W, YBR089C-A, YBR090C, YBR196C, YBR210W, YDL085W, YDL129W, YDR050C, YDR065W, YDR098C, YDR210W-C, YDR240C, YDR316W-A, YDR316W-B, YDR417C, YDR419W, YDR472W, YER097W, YER098W, YER137C, YER137C-A, YER177W, YGL005C, YGL062W, YGR024C, YGR038C-A, YGR084C, YGR192C, YGR215W, YGR240C, YGR242W, YHL034C, YHR173C, YHR174W, YJL045W, YJL223C, YJR009C, YKL060C, YKL119C, YKL127W, YKL152C, YLR027C, YLR028C, YLR044C, YML067C, YMR045C, YMR046C, YOL015W, YOL016C, YOL026C, YOL086C, YOL121C, YOR272W, YOR355W, YPL003W, YPL004C, YPL130W, YPL273W
Genes affected by TF deletion 919 genes
YBL113C, YBL086C, YBR004C, YBR006W, YCL048W, YCR012W, YDR034C-C, YDR064W, YDR400W, YDR432W, YDR404C, YER145C, YER118C, YER178W, YGL199C, YGR282C, YIL078W, YIL142W, YIL080W, YIL148W, YJR016C, YLR214W, YLR244C, YML114C, YMR014W, YMR045C, YML117W-A, YNL050C, YNL052W, YNL085W, YOL012C, YOL043C, YNR061C, YOR191W, YOR253W, YOR192C-A, YPL237W, YAL064W-B, YBR187W, YBR219C, YBR189W, YBR191W, YBR162C, YDL066W, YDL130W, YDR188W, YDR222W, YEL046C, YFR032C-A, YGL009C, YGL041C, YGL011C, YFR038W, YGR091W, YGR124W, YHR143W, YHR174W, YHR119W, YJL049W, YKL045W, YKL049C, YLR025W, YLR056W, YLR027C, YLR058C, YLR062C, YLR094C, YLR432W, YLR463C, YLR465C, YLR467W, YNL239W, YNL209W, YNL241C, YNL277W, YOR033C, YOR065W, YPL015C, YOR381W, YPL019C, YPR145W, YBL112C, YBR031W, YBL087C, YBR005W, YCR037C, YCR039C, YCR013C, YCL054W, YDR005C, YDR034C-D, YDR433W, YER173W, YER117W, YER177W, YGL168W, YGL200C, YHL015W, YHL047C, YIL082W, YIL083C, YJR015W, YJR047C, YLR213C, YLR249W, YMR011W, YMR015C, YMR046C, YNR056C, YOL014W, YOL016C, YOR190W, YOR254C, YOR192C-B, YOR194C, YAL003W, YAL035C-A, YAL036C, YAL038W, YDL061C, YDL095W, YDL097C, YDL067C, YDR187C, YDR251W, YEL011W, YEL076C, YFR033C, YGL040C, YGL012W, YGR123C, YGR155W, YGR157W, YHR112C, YHR142W, YHR179W, YJL080C, YJL114W, YJL116C, YJL086C, YLR028C, YLR061W, YLR466W, YNL274C, YOR068C, YOR007C, YPL014W, YPL048W, YOR380W, YPL050C, YPR138C, YDR050C, YBR092C, YBR096W, YDR158W, YDR100W, YDR500C, YFL039C, YFL045C, YFR009W, YGR063C, YGR035C, YHR083W, YHR025W, YJR143C, YJR145C, YJR147W, YKL016C, YJR118C, YLL034C, YLR340W, YLR372W, YMR105C, YMR107W, YOL104C, YOR317W, YOR289W, YPL268W, YPR048W, YPR020W, YPR052C, YPL235W, YBL027W, YBR283C, YBR287W, YDL192W, YDL226C, YDR276C, YDR341C, YDR314C, YER024W, YER026C, YER055C, YER056C-A, YER086W, YGL103W, YGL135W, YGL105W, YGL137W, YGR180C, YGR214W, YHR208W, YHR210C, YIL018W, YIL050W, YIL052C, YJL145W, YJL177W, YJL183W, YKL170W, YKL174C, YKL207W, YLR120C, YLR156W, YLR186W, YML085C, YML058C-A, YML058W-A, YMR316W, YNL301C, YNR030W, YPL142C, YFL029C, YBR127C, YBR067C, YDR157W, YDR098C-A, YDR131C, YFL013C, YGR060W, YGR034W, YHR026W, YIL177C, YJR117W, YKL017C, YLL061W, YLR304C, YLR367W, YLR339C, YMR131C, YNL180C, YOL077W-A, YOL139C, YOR344C, YPL265W, YPL271W, YAR062W, YBL024W, YBL058W, YBR250W, YCL020W, YDL191W, YER023W, YER081W, YER025W, YER083C, YER027C, YER087C-A, YGL102C, YGL136C, YGR211W, YGR183C, YGR185C, YHR211W, YIL051C, YJL180C, YJL212C, YKL167C, YKL169C, YKL206C, YML022W, YML053C, YML024W, YML026C, YML086C, YML028W, YML058W, YNL300W, YNL332W, YNL302C, YNL338W, YOR096W, YPL079W, YPL111W, YPL143W, YPL081W, YPL145C, YBR010W, YBR012C, YCR021C, YDR012W, YDR072C, YDR408C, YDR444W, YER119C-A, YGL238W, YGL177W, YGR284C, YHL050C, YGR286C, YHR001W-A, YIL122W, YJR026W, YJR094W-A, YKR022C, YKR053C, YLR286C, YLR257W, YLR287C-A, YMR020W, YML125C, YNL030W, YOL052C-A, YNR071C, YOR199W, YPL183W-A, YAL044C, YAR015W, YBR169C, YDL070W, YDL133C-A, YDL072C, YDR224C, YGR161C-C, YGR161W-A, YHR123W, YJL121C, YJL063C, YKL117W, YKL056C, YLR100W, YLR038C, YLR441C, YML008C, YMR202W, YNL217W, YNL283C, YOR385W, YBL091C, YBR007C, YBL092W, YBR009C, YBR039W, YCR049C, YCL064C, YDR377W, YDR411C, YER119C, YER148W, YER120W, YER150W, YER152C, YHL017W, YGR285C, YIL117C, YIL121W, YIL123W, YIL155C, YJR025C, YKR048C, YNL054W-A, YNL055C, YOL052C, YOR260W, YOR198C, YOR230W, YOR232W, YOR234C, YPL248C, YPL218W, YPL249C-A, YJR148W, YAL012W, YAL042W, YAR007C, YAL043C-A, YBR196C, YBR230C, YDL075W, YDR225W, YER003C, YEL053C, YGL016W, YGL048C, YGR161C, YGR161W-B, YHR181W, YJL124C, YKL081W, YKL085W, YKL087C, YLR101C, YLR437C, YLR438W, YLR410W-A, YML007W, YNL248C, YOR078W, YPL026C, YPL028W, YBR132C, YBR106W, YCR084C, YDL007W, YDL039C, YDR134C, YDR168W, YDR502C, YGR037C, YHR089C, YHR093W, YIR005W, YJL026W, YJR124C, YLL036C, YLL009C, YLR312W-A, YLR344W, YLR378C, YLR380W, YLR350W, YOL086C, YOL088C, YOR293W, YOR323C, YPL278C, YPR058W, YPR028W, YPR010C, YAR073W, YBL003C, YBL033C, YBL064C, YBR265W, YDL200C, YER036C, YGL147C, YGL117W, YGR254W, YGR192C, YIL022W, YHR215W, YHR217C, YJL191W, YKL180W, YKL151C, YKL182W, YLR162W, YLR194C, YLR134W, YLR196W, YML031W, YMR318C, YPL090C, YFL014W, YFL031W, YBR099C, YBR105C, YDR105C, YDR471W, YFL017W-A, YFL048C, YGR038W, YHR030C, YHR060W, YHR092C, YHR064C, YJR150C, YJR121W, YJR123W, YLL037W, YLL041C, YLR379W, YLR349W, YMR142C, YOL111C, YPL273W, YPL279C, YPR059C, YNR043W, YAR071W, YAR075W, YBL002W, YBL032W, YBR296C, YDL229W, YDR346C, YER031C, YER090W, YGL112C, YGR219W, YGR189C, YGR253C, YGR255C, YGR257C, YIL021W, YIL053W, YIL023C, YHR216W, YJL184W, YJL154C, YJL188C, YJL158C, YJL190C, YKL210W, YKL148C, YKL150W, YKL181W, YML090W, YML092C, YML063W, YMR292W, YNR001C, YNR003C, YNL312W, YNR036C, YPL117C, YGL062W, YBR048W, YBR052C, YCL067C, YDR382W, YDR386W, YDR418W, YDR450W, YDR388W, YER131W, YGL189C, YHR010W, YJR032W, YJR064W, YJR070C, YKR057W, YKR059W, YKR061W, YLR259C, YLR293C, YLR264W, YNL036W, YNL067W, YNL069C, YOL027C, YOL002C, YOR209C, YOR243C, YPL225W, YDR345C, YBR205W, YDL082W, YDL084W, YDR261W-A, YDR210W, YEL026W, YEL058W, YER009W, YFR052W, YGR138C, YGR109W-B, YJL097W, YJL101C, YKL058W, YKL060C, YKL096W, YKL127W, YLR044C, YLR076C, YLR110C, YLR414C, YLR447C, YLR449W, YML012W, YMR174C, YMR242C, YNL255C, YNL227C, YOR053W, YEL054C, YBR015C, YCR053W, YDR447C, YDR417C, YER156C, YGL245W, YGL184C, YHR005C-A, YHR007C, YHL001W, YHL031C, YIL157C, YJR065C, YKR088C, YLR229C, YML126C, YML128C, YMR058W, YNL031C, YNL066W, YNL037C, YOL026C, YOL057W, YOL030W, YOL061W, YPL220W, YJR041C, YAR018C, YAL022C, YBR240C, YDL081C, YDL083C, YDR233C, YDR209C, YGL022W, YFR051C, YGL028C, YGR135W, YGR137W, YGR109W-A, YGR167W, YHR193C, YHR133C, YHR163W, YKL057C, YLR075W, YLR413W, YML009C, YLR448W, YMR203W, YMR235C, YMR205C, YOR016C, YOR020C, YPL061W, YPL067C, YBR299W, YBR078W, YBR084C-A, YBR146W, YDL015C, YDL046W, YCR097W, YDL021W, YFR021W, YFL061W, YFR024C-A, YGR019W, YHR071W, YHR072W-A, YJL002C, YJL034W, YKL030W, YKL001C, YKL032C, YKL003C, YLL044W, YLR388W, YLR390W, YMR149W, YMR120C, YNL197C, YOL120C, YOL092W, YOL126C, YOL158C, YOR331C, YOR302W, YOR335C, YPR002W, YPR004C, YOR383C, YBL072C, YDR322C-A, YDR353W, YDR357C, YDR298C, YER043C, YGL121C, YGL123W, YGR196C, YGR260W, YGR264C, YGR234W, YHR219W, YJL193W, YKL153W, YLR172C, YNR047W, YPL094C, YPL132W, YBR143C, YDL014W, YCR096C, YDR174W, YDR176W, YDR544C, YFR022W, YFR024C, YIR012W, YJL001W, YJR158W, YKL029C, YJR133W, YLR008C, YLL045C, YLL018C, YLR355C, YLR325C, YMR085W, YMR116C, YMR146C, YMR090W, YMR121C, YMR152W, YNL160W, YNL162W, YOL151W, YOL121C, YOL123W, YOR332W, YOR303W, YPR061C, YPR067W, YBL040C, YDR354W, YDR297W, YER098W, YER044C, YGL086W, YGL120C, YGR195W, YGR259C, YIL033C, YIL067C, YKL152C, YKL216W, YKL154W, YKL156W, YLR197W, YLR167W, YLR203C, YML073C, YMR303C, YNL322C, YNR046W, YOR112W, YOR174W, YPL131W, YPR182W, YER091C, YBR054W, YCR004C, YCR034W, YDR454C, YER138C, YGL191W, YGL225W, YGL258W, YHL004W, YHL034C, YHL009W-A, YHR020W, YIL136W, YIL170W, YIL108W, YJR104C, YJR108W, YKR065C, YMR002W, YMR035W, YMR006C, YNL073W, YOL037C, YOL039W, YOL072W, YOR277C, YOR247W, YOR251C, YPL197C, YPL199C, YAL060W, YAL064C-A, YAR053W, YDR212W, YEL034W, YGL031C, YGL001C, YGR144W, YGR148C, YGR176W, YHR141C, YJL143W, YKL103C, YLR048W, YMR182C, YOR063W, YBR055C, YBR025C, YBL109W, YBR059C, YCR001W, YCR028C-A, YCR031C, YCR005C, YDR029W, YDR091C, YDR427W, YFL002W-B, YER165W, YGL226C-A, YHL033C, YHR019C, YIL133C, YIL171W, YJR105W, YJR045C, YKR094C, YKR033C, YKR096W, YLR267W, YLR300W, YLR271W, YMR038C, YNL072W, YOL036W, YOL040C, YOR276W, YOR248W, YOR280C, YPL198W, YPL234C, YKL009W, YAR035W, YBR244W, YDR210W-A, YDR210W-C, YDR211W, YEL066W, YER018C, YEL037C, YFR055W, YGL030W, YGL036W, YGR118W, YHR203C, YJL104W, YJL136C, YJL138C, YJL078C, YKL096W-A, YMR243C, YMR217W, YPL042C, YPR162C, YPR107C, YBR116C, YDR154C, YDR186C, YFL037W, YFR031C-A, YGR085C, YGR027C, YGR087C, YHR046C, YJL041W, YJL012C, YJL014W, YJR135W-A, YKL006W, YKL008C, YLL024C, YMR095C, YMR130W, YOL098C, YOR369C, YOR343C-B, YCL040W, YCL042W, YIL070C, YJR009C, YKL192C, YLR150W, YLR180W, YLR212C, YNL327W, YNR053C, YPL136W, YBR147W, YBR121C, YDR155C, YGR082W, YGR084C, YHR047C, YJL009W, YLR327C, YLR359W, YLR333C, YMR096W, YOL127W, YOR306C, YOR312C, YOR343C-A, YOR374W, YPR069C, YPR007C, YPR009W, YPR073C, YPR043W, YBL077W, YBL048W, YCL043C, YDR360W, YDR365C, YER102W, YIL069C, YJL200C, YKL197C, YLR149C, YML107C, YMR307W, YNR021W
Genes supported by both experiments 27 genes
YAL038W, YBR025C, YBR196C, YDR050C, YDR210W-C, YDR417C, YER098W, YER177W, YGL062W, YGR084C, YGR192C, YHL034C, YHR174W, YJR009C, YKL060C, YKL127W, YKL152C, YLR027C, YLR028C, YLR044C, YMR045C, YMR046C, YOL016C, YOL026C, YOL086C, YOL121C, YPL273W