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EDS1

YBR033W

View at SGD ↗

Putative zinc cluster protein; YBR033W is not an essential gene

01 / RECOMMENDED MATRIX

Best-performing DNA-binding model.

RecommendedSource: Badis et. al.
Fisher’s P-value0.02798
Information content9.017
Max PWM score7.76
Recommended cutoff7.79
View and copy the recommended matrices ↘
Position frequency matrix (PFM)
A | 0.01 0.01 0.97 0.75 0.48 0.97 0.83 
C | 0.01 0.01 0.01 0.01 0.24 0.01 0.01 
G | 0.97 0.97 0.01 0.01 0.10 0.01 0.01 
T | 0.01 0.01 0.01 0.24 0.19 0.01 0.15 
Position count matrix (PCM)
A |   1   1  97  75  48  97  83 
C |   1   1   1   1  24   1   1 
G |  97  97   1   1  10   1   1 
T |   1   1   1  24  19   1  15 
Position weight matrix (PWM)
A | -3.47 -3.47  1.11  0.85  0.41  1.11  0.95 
C | -2.89 -2.89 -2.89 -2.89  0.29 -2.89 -2.89 
G |  1.68  1.68 -2.89 -2.89 -0.59 -2.89 -2.89 
T | -3.47 -3.47 -3.47 -0.29 -0.52 -3.47 -0.76 
02 / COMPARATIVE BENCHMARKS

Alternative candidate matrices 1

Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.

EDS1Foat et. al.P = 1View matrix ↘
Sequence logo for EDS1
Fisher’s P-value1
Information content15.23
Max PWM score15.41
Recommended cutoff11.56
Position frequency matrix (PFM)
A | 0.12 0.01 0.12 0.01 0.01 0.50 0.03 0.42 0.17 0.01 0.24 0.01 0.74 
C | 0.05 0.18 0.61 0.14 0.97 0.01 0.95 0.57 0.02 0.08 0.08 0.01 0.24 
G | 0.01 0.81 0.01 0.01 0.01 0.47 0.01 0.01 0.75 0.01 0.49 0.08 0.01 
T | 0.82 0.01 0.26 0.84 0.01 0.02 0.01 0.01 0.05 0.90 0.19 0.90 0.01 
Position count matrix (PCM)
A |  12   1  12   1   1  50   3  42  17   1  24   1  74 
C |   5  18  61  14  97   1  95  56   2   8   8   1  24 
G |   1  81   1   1   1  47   1   1  75   1  49   8   1 
T |  82   1  26  84   1   2   1   1   5  90  19  90   1 
Position weight matrix (PWM)
A | -0.98 -3.47 -0.98 -3.47 -3.47  0.45 -2.37  0.27 -0.63 -3.47 -0.29 -3.47  0.84 
C | -1.28  0.00  1.22 -0.25  1.68 -2.89  1.66  1.15 -2.20 -0.81 -0.81 -2.89  0.29 
G | -2.89  1.50 -2.89 -2.89 -2.89  0.96 -2.89 -2.89  1.43 -2.89  1.00 -0.81 -2.89 
T |  0.94 -3.47 -0.21  0.97 -3.47 -2.77 -3.47 -3.47 -1.86  1.03 -0.52  1.03 -3.47 
03 / EXPERIMENTAL CONTEXT

Gene-level annotations and interactions.

Genes bound in ChIP-chip experiments 81 genes

YBL068W, YBL070C, YBR109C, YBR110W, YBR185C, YBR186W, YCL002C, YCL006C, YCL007C, YCL008C, YCL009C, YCL010C, YCR002C, YCR004C, YCR005C, YCR006C, YCR008W, YCR012W, YCR023C, YDL044C, YDL092W, YDL094C, YDL108W, YDL109C, YDR056C, YDR057W, YEL002C, YEL015W, YEL016C, YER060W, YER183C, YFR023W, YGL133W, YGR066C, YGR100W, YJL037W, YJL038C, YJR012C, YJR013W, YJR041C, YJR042W, YJR098C, YJR099W, YJR132W, YJR154W, YKL026C, YKL061W, YKL072W, YKL128C, YKL167C, YKL177W, YKL179C, YLL035W, YLL036C, YLL038C, YLR199C, YLR200W, YLR412W, YML065W, YML066C, YMR126C, YMR187C, YMR200W, YMR267W, YMR283C, YNL259C, YOR058C, YOR059C, YOR128C, YOR148C, YOR256C, YOR257W, YOR353C, YPL118W, YPL119C, YPL150W, YPL151C, YPL185W, YPL238C, YPL258C, YPR118W

Genes affected by TF deletion 1 genes

No Data

Predicted TF–TF partners 5 genes

DOT6, HSF1, RGT1, STB3, TOD6

Explore 5 original interaction plots →