ARO80
YDR421W
Zinc finger transcriptional activator of the Zn2Cys6 family; activates transcription of aromatic amino acid catabolic genes in the presence of aromatic amino acids
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.052 0.091 0.018 0.243 0.373 0.569 0.198 0.085 0.276 0.212 0.053 0.026 0.076 C | 0.827 0.044 0.062 0.223 0.180 0.137 0.146 0.339 0.234 0.028 0.877 0.151 0.066 G | 0.058 0.833 0.798 0.100 0.075 0.170 0.188 0.187 0.247 0.208 0.035 0.747 0.834 T | 0.063 0.032 0.123 0.434 0.372 0.124 0.468 0.388 0.244 0.552 0.036 0.075 0.024
A | 5 9 1 24 37 56 19 8 27 21 5 2 7 C | 82 4 6 22 18 13 14 33 23 2 87 15 6 G | 5 83 79 10 7 17 18 18 24 20 3 74 83 T | 6 3 12 43 37 12 46 38 24 55 3 7 2
A | -1.82 -1.26 -2.88 -0.28 0.15 0.58 -0.48 -1.33 -0.15 -0.41 -1.80 -2.51 -1.44 C | 1.52 -1.41 -1.07 0.21 0.00 -0.27 -0.21 0.63 0.26 -1.86 1.58 -0.18 -1.00 G | -1.13 1.53 1.49 -0.59 -0.88 -0.06 0.04 0.04 0.32 0.14 -1.64 1.42 1.53 T | -1.63 -2.30 -0.96 0.30 0.15 -0.95 0.38 0.19 -0.27 0.55 -2.18 -1.45 -2.59
Alternative candidate matrices 5
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
ARO80_AFoat et. al.P = 0.01844View matrix ↘
A | 0.01 0.03 0.21 0.01 0.01 0.03 0.03 0.93 0.24 0.06 0.11 0.01 C | 0.38 0.13 0.68 0.01 0.01 0.01 0.01 0.01 0.44 0.05 0.16 0.01 G | 0.18 0.15 0.01 0.96 0.97 0.95 0.01 0.01 0.27 0.75 0.32 0.34 T | 0.43 0.69 0.10 0.02 0.01 0.01 0.95 0.05 0.06 0.13 0.41 0.65
A | 1 3 21 1 1 3 3 93 24 6 11 1 C | 38 13 68 1 1 1 1 1 44 5 16 1 G | 18 15 1 96 97 95 1 1 27 75 32 34 T | 43 69 10 2 1 1 95 5 6 13 41 65
A | -3.47 -2.37 -0.42 -3.47 -3.47 -2.37 -2.37 1.07 -0.29 -1.67 -1.07 -3.47 C | 0.75 -0.33 1.33 -2.89 -2.89 -2.89 -2.89 -2.89 0.89 -1.28 -0.12 -2.89 G | 0.00 -0.18 -2.89 1.67 1.68 1.66 -2.89 -2.89 0.41 1.43 0.58 0.64 T | 0.30 0.77 -1.16 -2.77 -3.47 -3.47 1.09 -1.86 -1.67 -0.90 0.25 0.71
ARO80_BFoat et. al.P = 2.13e-05View matrix ↘
A | 0.13 0.39 0.90 0.01 0.01 0.06 0.56 0.04 0.03 0.66 0.42 0.37 0.01 0.01 0.96 0.01 0.12 0.07 0.11 C | 0.33 0.41 0.08 0.85 0.97 0.06 0.10 0.04 0.46 0.02 0.47 0.17 0.57 0.97 0.01 0.97 0.22 0.11 0.49 G | 0.01 0.19 0.01 0.13 0.01 0.01 0.34 0.23 0.08 0.02 0.01 0.33 0.03 0.01 0.02 0.01 0.01 0.32 0.40 T | 0.53 0.01 0.01 0.01 0.01 0.86 0.01 0.69 0.43 0.30 0.10 0.13 0.40 0.01 0.01 0.01 0.65 0.51 0.01
A | 13 39 90 1 1 6 56 4 3 66 42 37 1 1 96 1 12 7 11 C | 33 41 8 85 97 6 10 4 46 2 47 17 56 97 1 97 22 11 49 G | 1 19 1 13 1 1 34 23 8 2 1 33 3 1 2 1 1 32 40 T | 53 1 1 1 1 86 1 69 43 30 10 13 40 1 1 1 65 51 1
A | -0.90 0.20 1.03 -3.47 -3.47 -1.67 0.56 -2.08 -2.37 0.72 0.27 0.15 -3.47 -3.47 1.10 -3.47 -0.98 -1.52 -1.07 C | 0.61 0.82 -0.81 1.55 1.68 -1.10 -0.59 -1.50 0.94 -2.20 0.96 -0.06 1.15 1.68 -2.89 1.68 0.20 -0.49 1.00 G | -2.89 0.05 -2.89 -0.33 -2.89 -2.89 0.64 0.25 -0.81 -2.20 -2.89 0.61 -1.79 -2.89 -2.20 -2.89 -2.89 0.58 0.80 T | 0.50 -3.47 -3.47 -3.47 -3.47 0.99 -3.47 0.77 0.30 -0.06 -1.16 -0.90 0.22 -3.47 -3.47 -3.47 0.71 0.47 -3.47
ARO80Macisaac et. alP = 3.59e-05View matrix ↘
A | 0.143 0.001 0.001 0.286 0.001 0.428 0.429 0.001 0.428 0.428 0.001 0.001 0.001 0.428 0.143 0.855 0.143 0.001 0.001 0.143 0.001 0.001 0.001 C | 0.855 0.997 0.001 0.143 0.143 0.001 0.143 0.001 0.001 0.143 0.997 0.997 0.001 0.570 0.286 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 G | 0.001 0.001 0.997 0.143 0.713 0.285 0.286 0.001 0.001 0.428 0.001 0.001 0.997 0.001 0.570 0.001 0.286 0.001 0.001 0.855 0.001 0.001 0.997 T | 0.001 0.001 0.001 0.429 0.143 0.285 0.143 0.997 0.570 0.001 0.001 0.001 0.001 0.001 0.001 0.143 0.570 0.997 0.997 0.001 0.001 0.001 0.001
A | 14 0 0 28 0 42 42 0 42 42 0 0 0 42 14 85 14 0 0 14 0 0 0 C | 85 99 0 14 14 0 14 0 0 14 99 99 0 56 28 0 0 0 0 0 99 99 0 G | 0 0 99 14 71 28 28 0 0 42 0 0 99 0 56 0 28 0 0 85 0 0 99 T | 0 0 0 42 14 28 14 99 56 0 0 0 0 0 0 14 56 99 99 0 0 0 0
A | -0.81 -5.77 -5.77 -0.11 -5.77 0.29 0.29 -5.77 0.29 0.29 -5.77 -5.77 -5.77 0.29 -0.81 0.98 -0.81 -5.77 -5.77 -0.81 -5.77 -5.77 -5.77 C | 1.56 1.71 -5.19 -0.23 -0.23 -5.19 -0.23 -5.19 -5.19 -0.23 1.71 1.71 -5.19 1.15 0.46 -5.19 -5.19 -5.19 -5.19 -5.19 1.71 1.71 -5.19 G | -5.19 -5.19 1.71 -0.23 1.38 0.46 0.46 -5.19 -5.19 0.87 -5.19 -5.19 1.71 -5.19 1.15 -5.19 0.46 -5.19 -5.19 1.56 -5.19 -5.19 1.71 T | -5.77 -5.77 -5.77 0.29 -0.81 -0.12 -0.81 1.14 0.58 -5.77 -5.77 -5.77 -5.77 -5.77 -5.77 -0.81 0.58 1.14 1.14 -5.77 -5.77 -5.77 -5.77
ARO80Zhu et. al.P = 0.004563View matrix ↘
A | 0.04 0.01 0.01 0.01 0.01 0.02 0.66 0.69 C | 0.74 0.23 0.97 0.02 0.01 0.36 0.01 0.07 G | 0.03 0.01 0.01 0.96 0.97 0.30 0.01 0.06 T | 0.19 0.75 0.01 0.01 0.01 0.33 0.32 0.18
A | 4 1 1 1 1 2 66 69 C | 74 23 97 2 1 36 1 7 G | 3 1 1 96 97 30 1 6 T | 19 75 1 1 1 33 32 18
A | -2.08 -3.47 -3.47 -3.47 -3.47 -2.77 0.72 0.77 C | 1.41 0.25 1.68 -2.20 -2.89 0.69 -2.89 -0.94 G | -1.79 -2.89 -2.89 1.67 1.68 0.51 -2.89 -1.10 T | -0.52 0.85 -3.47 -3.47 -3.47 0.03 0.00 -0.58
ARO80Zhao and StormoP = 0.003804View matrix ↘
A | 0.221 0.174 0.001 0.001 0.001 0.206 0.495 0.355 C | 0.314 0.192 0.990 0.065 0.007 0.281 0.090 0.189 G | 0.202 0.190 0.008 0.933 0.991 0.284 0.130 0.197 T | 0.262 0.444 0.001 0.001 0.001 0.230 0.285 0.260
A | 22 17 0 0 0 20 49 35 C | 31 19 99 6 0 28 9 18 G | 20 19 0 93 99 28 13 19 T | 26 44 0 0 0 23 28 26
A | -0.37 -0.61 -5.77 -5.77 -5.77 -0.44 0.44 0.10 C | 0.56 0.06 1.70 -1.02 -3.25 0.45 -0.69 0.05 G | 0.12 0.05 -3.11 1.65 1.71 0.46 -0.33 0.09 T | -0.20 0.33 -5.77 -5.77 -5.77 -0.33 -0.12 -0.21
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 91 genes
YBR012W-A, YBR012W-B, YBR099C, YBR152W, YBR160W, YCL065W, YCL066W, YCL067C, YCL074W, YCR018C-A, YCR019W, YCR039C, YCR040W, YCR041W, YDL091C, YDR048C, YDR183W, YDR184C, YDR290W, YDR291W, YDR370C, YDR371W, YDR375C, YDR376W, YDR377W, YDR378C, YDR379W, YDR380W, YDR381W, YDR382W, YDR421W, YDR468C, YDR469W, YDR523C, YER061C, YFL059W, YFL060C, YGR053C, YGR054W, YGR166W, YGR244C, YHR132C, YHR133C, YHR134W, YHR135C, YHR136C, YHR137W, YHR138C, YHR139C, YHR139C-A, YHR140W, YHR141C, YHR142W, YHR143W, YJL008C, YJR001W, YKL051W, YKL052C, YKL072W, YKR059W, YKR060W, YLR082C, YMR194W, YMR283C, YNL012W, YNL013C, YNL117W, YNL118C, YNL122C, YNL123W, YNL124W, YNL125C, YNL126W, YNL337W, YNR006W, YOL001W, YOL002C, YOL116W, YOR005C, YOR110W, YOR205C, YOR206W, YOR218C, YOR273C, YOR274W, YPL018W, YPL019C, YPL251W, YPL253C, YPR155C, YPR162C
Genes affected by TF deletion 140 genes
YCR040W, YER178W, YGR280C, YIL082W-A, YJR020W, YOR225W, YOR257W, YDL131W, YFR032C-A, YGL009C, YHR174W, YBR029C, YBR031W, YER146W, YMR044W, YOR252W, YOR226C, YCR097W-A, YHR143W-A, YJL052W, YLR405W, YNL244C, YDR096W, YGR063C, YHR053C, YNL147W, YNL149C, YOR287C, YOR351C, YPR020W, YPL187W, YGL075C, YHR208W, YKL172W, YOR103C, YBR091C, YDR461W, YGR064W, YHR021C, YNL146W, YOL077W-A, YNL280C, YCL018W, YDR281C, YIL015W, YLR185W, YML055W, YCL065W, YDR378C, YLR287C-A, YNL030W, YPL183W-A, YDL106C, YHR123W, YNL279W, YOR045W, YBR011C, YCR045C, YJR148W, YBR162W-A, YER001W, YEL021W, YLR348C, YOL144W, YOL086C, YOR357C, YGR192C, YKL209C, YKL178C, YLR343W, YLR349W, YNL150W, YOL143C, YOR221C, YBR262C, YIL027C, YKL177W, YMR323W, YHR010W, YLR262C-A, YLR234W, YOR239W, YGR140W, YLR040C, YLR420W, YNL259C, YOR393W, YCL066W, YHR005C-A, YIL127C, YOR210W, YDL081C, YKL120W, YLR041W, YLR043C, YOR020C, YCR097W, YFL026W, YGR015C, YHR072W-A, YLR388W, YOL126C, YPR062W, YDR322C-A, YGL089C, YBR145W, YFL023W, YNL162W, YPL281C, YBR268W, YJR004C, YKL216W, YMR303C, YNR044W, YDR056C, YLR303W, YAL033W, YER019C-A, YGL031C, YGR148C, YHR141C, YJL141C, YCR028C-A, YDR421W, YLR302C, YNL070W, YGL032C, YGR114C, YLR051C, YLR421C, YBR118W, YGR025W, YJR135W-A, YOL132W, YDL184C, YJR009C, YKL164C, YKL163W, YML081C-A, YOR182C
Genes supported by both experiments 6 genes
YCL065W, YCL066W, YCR040W, YDR378C, YDR421W, YHR141C