ARG80
YMR042W, ARGRI, ARGR1
Transcription factor involved in regulation of arginine-responsive genes; acts with Arg81p and Arg82p
Best-performing DNA-binding model.
View and copy the recommended matrices ↘
A | 0.035 0.031 0.158 0.074 0.051 0.229 0.176 0.360 0.123 0.199 0.427 0.029 C | 0.244 0.086 0.102 0.564 0.836 0.168 0.373 0.322 0.355 0.147 0.258 0.024 G | 0.101 0.088 0.199 0.133 0.060 0.355 0.102 0.296 0.283 0.326 0.220 0.929 T | 0.620 0.796 0.541 0.229 0.052 0.248 0.350 0.023 0.239 0.328 0.096 0.018
A | 3 3 15 7 5 22 17 36 12 19 42 2 C | 24 8 10 56 83 16 37 32 35 14 25 2 G | 10 8 19 13 6 35 10 29 28 32 22 92 T | 62 79 54 22 5 24 35 2 23 32 9 1
A | -2.21 -2.33 -0.71 -1.46 -1.84 -0.33 -0.60 0.12 -0.96 -0.48 0.29 -2.40 C | 0.30 -0.74 -0.57 1.14 1.54 -0.07 0.73 0.58 0.68 -0.20 0.36 -2.01 G | -0.58 -0.72 0.10 -0.30 -1.10 0.68 -0.57 0.50 0.45 0.59 0.20 1.64 T | 0.66 0.91 0.53 -0.33 -1.82 -0.25 0.09 -2.63 -0.29 0.02 -1.20 -2.88
Alternative candidate matrices 5
Historical matrix candidates from the original ScerTF database. Expand a source to inspect its original logo, scores, and matrix values.
ARG80_AFoat et. al.P = 7.87e-07View matrix ↘
A | 0.04 0.01 0.01 0.56 0.77 0.85 0.03 0.28 0.01 0.06 0.97 0.90 0.83 0.27 0.50 0.29 C | 0.48 0.12 0.01 0.01 0.13 0.11 0.12 0.62 0.01 0.01 0.01 0.01 0.16 0.01 0.04 0.42 G | 0.30 0.86 0.97 0.01 0.02 0.03 0.75 0.06 0.97 0.93 0.01 0.08 0.01 0.46 0.46 0.01 T | 0.18 0.01 0.01 0.42 0.09 0.01 0.10 0.04 0.01 0.01 0.01 0.01 0.01 0.27 0.01 0.28
A | 4 1 1 56 77 85 3 28 1 6 97 90 83 27 50 28 C | 48 12 1 1 13 11 12 62 1 1 1 1 16 1 4 42 G | 30 86 97 1 2 3 75 6 97 93 1 8 1 46 46 1 T | 18 1 1 42 9 1 10 4 1 1 1 1 1 27 1 28
A | -2.08 -3.47 -3.47 0.56 0.88 0.98 -2.37 -0.13 -3.47 -1.67 1.11 1.03 0.95 -0.17 0.45 -0.10 C | 0.98 -0.41 -2.89 -2.89 -0.33 -0.49 -0.41 1.24 -2.89 -2.89 -2.89 -2.89 -0.12 -2.89 -1.50 0.85 G | 0.51 1.56 1.68 -2.89 -2.20 -1.79 1.43 -1.10 1.68 1.64 -2.89 -0.81 -2.89 0.94 0.94 -2.89 T | -0.58 -3.47 -3.47 0.27 -1.27 -3.47 -1.16 -2.08 -3.47 -3.47 -3.47 -3.47 -3.47 -0.17 -3.47 -0.13
ARG80_BFoat et. al.P = 1View matrix ↘
A | 0.16 0.48 0.75 0.93 0.14 0.01 0.73 0.10 0.21 0.05 0.37 0.28 0.44 0.60 0.01 0.09 0.41 0.95 0.01 0.01 0.41 0.04 0.35 C | 0.01 0.49 0.12 0.06 0.01 0.01 0.11 0.54 0.02 0.82 0.29 0.19 0.19 0.03 0.14 0.73 0.20 0.01 0.80 0.01 0.26 0.13 0.43 G | 0.66 0.02 0.08 0.01 0.84 0.01 0.14 0.13 0.59 0.12 0.01 0.17 0.01 0.01 0.82 0.05 0.01 0.03 0.01 0.96 0.02 0.24 0.19 T | 0.17 0.01 0.04 0.01 0.01 0.97 0.02 0.23 0.19 0.01 0.34 0.36 0.37 0.36 0.03 0.13 0.38 0.01 0.18 0.02 0.31 0.59 0.03
A | 16 48 75 93 14 1 73 10 21 5 37 28 44 60 1 9 41 95 1 1 41 4 35 C | 1 49 12 6 1 1 11 54 2 82 28 19 19 3 14 73 20 1 80 1 26 13 43 G | 66 2 8 1 84 1 14 13 59 12 1 17 1 1 82 5 1 3 1 96 2 24 19 T | 17 1 4 1 1 97 2 23 19 1 34 36 37 36 3 13 38 1 18 2 31 59 3
A | -0.69 0.41 0.85 1.07 -0.83 -3.47 0.82 -1.16 -0.42 -1.86 0.15 -0.13 0.32 0.63 -3.47 -1.27 0.25 1.09 -3.47 -3.47 0.25 -2.08 0.09 C | -2.89 1.00 -0.41 -1.10 -2.89 -2.89 -0.49 1.10 -2.20 1.52 0.48 0.05 0.05 -1.79 -0.25 1.40 0.11 -2.89 1.49 -2.89 0.37 -0.33 0.87 G | 1.30 -2.20 -0.81 -2.89 1.54 -2.89 -0.25 -0.33 1.19 -0.41 -2.89 -0.06 -2.89 -2.89 1.52 -1.28 -2.89 -1.79 -2.89 1.67 -2.20 0.29 0.05 T | -0.63 -3.47 -2.08 -3.47 -3.47 1.11 -2.77 -0.33 -0.52 -3.47 0.06 0.12 0.15 0.12 -2.37 -0.90 0.17 -3.47 -0.58 -2.77 -0.03 0.61 -2.37
ARG80Macisaac et. alP = 0.006027View matrix ↘
A | 0.562 0.001 0.997 0.001 0.291 0.001 C | 0.001 0.001 0.001 0.997 0.001 0.852 G | 0.001 0.997 0.001 0.001 0.272 0.001 T | 0.436 0.001 0.001 0.001 0.437 0.146
A | 56 0 99 0 29 0 C | 0 0 0 99 0 85 G | 0 99 0 0 27 0 T | 43 0 0 0 43 14
A | 0.56 -5.77 1.14 -5.77 -0.09 -5.77 C | -5.19 -5.19 -5.19 1.71 -5.19 1.55 G | -5.19 1.71 -5.19 -5.19 0.41 -5.19 T | 0.31 -5.77 -5.77 -5.77 0.31 -0.78
ARG80_BMorozov et. al.P = 0.02231View matrix ↘
A | 0.149 0.111 0.053 0.743 0.073 0.492 0.105 0.094 0.148 C | 0.523 0.747 0.150 0.129 0.185 0.048 0.654 0.805 0.077 G | 0.260 0.059 0.691 0.081 0.140 0.430 0.196 0.090 0.645 T | 0.069 0.083 0.106 0.047 0.603 0.030 0.045 0.011 0.131
A | 14 11 5 74 7 49 10 9 14 C | 52 74 15 12 18 4 65 80 7 G | 26 5 69 8 14 43 19 9 64 T | 6 8 10 4 60 3 4 1 13
A | -0.76 -1.06 -1.80 0.84 -1.48 0.43 -1.11 -1.23 -0.77 C | 1.07 1.42 -0.18 -0.33 0.03 -1.32 1.29 1.50 -0.85 G | 0.37 -1.12 1.35 -0.80 -0.25 0.87 0.09 -0.69 1.28 T | -1.53 -1.35 -1.10 -1.92 0.63 -2.37 -1.96 -3.37 -0.89
ARG80_CMorozov et. al.P = 0.00715View matrix ↘
A | 0.604 0.133 0.058 0.750 0.036 0.044 0.231 0.825 C | 0.126 0.181 0.108 0.128 0.039 0.039 0.539 0.064 G | 0.206 0.269 0.773 0.083 0.888 0.094 0.140 0.082 T | 0.064 0.417 0.060 0.039 0.036 0.822 0.090 0.028
A | 60 13 5 75 3 4 23 82 C | 12 18 10 12 3 3 53 6 G | 20 26 77 8 88 9 14 8 T | 6 41 6 3 3 82 9 2
A | 0.64 -0.88 -1.71 0.85 -2.18 -1.98 -0.33 0.95 C | -0.36 0.01 -0.51 -0.34 -1.53 -1.53 1.10 -1.03 G | 0.13 0.40 1.46 -0.77 1.60 -0.65 -0.25 -0.79 T | -1.61 0.26 -1.67 -2.10 -2.18 0.94 -1.27 -2.44
Gene-level annotations and interactions.
Genes bound in ChIP-chip experiments 80 genes
YBL019W, YBL074C, YBR028C, YCR018C-A, YCR019W, YDL044C, YDL068W, YDL071C, YDR003W, YDR012W, YDR042C, YDR048C, YDR064W, YDR065W, YDR098C-A, YDR098C-B, YDR131C, YDR160W, YDR210W-D, YDR245W, YDR279W, YDR434W, YDR468C, YDR469W, YDR473C, YDR495C, YEL050C, YER013W, YER041W, YER069W, YER077C, YER115C, YER135C, YER138C, YFL023W, YFL024C, YFR001W, YGL001C, YGL192W, YGL194C, YGL202W, YGL204C, YGR218W, YGR283C, YHR011W, YHR155W, YJL088W, YJL096W, YJL097W, YJL175W, YJL191W, YJL192C, YJR100C, YKL057C, YLR287C, YLR302C, YML031W, YML098W, YML099C, YMR098C, YMR194W, YNL050C, YNL146W, YNL258C, YNR050C, YOL058W, YOL079W, YOL115W, YOL140W, YOR005C, YOR280C, YOR282W, YOR302W, YOR303W, YOR369C, YPL123C, YPL125W, YPL198W, YPL265W, YPR104C
Genes affected by TF deletion 110 genes
YJR048W, YJR085C, YDR222W, YOR033C, YOR377W, YDL067C, YEL076C, YEL017C-A, YOR038C, YPL014W, YPL016W, YMR103C, YOL104C, YOL140W, YDR276C, YGL071W, YGR248W, YGR250C, YMR256C, YPL112C, YDR161W, YFR006W, YGR064W, YMR104C, YOL105C, YPL271W, YDR279W, YER057C, YGR211W, YGR183C, YLR121C, YLR183C, YML084W, YMR285C, YPL111W, YCR021C, YHR001W-A, YLR252W, YOR231W, YOR267C, YPL245W, YDL072C, YOR043W, YOR075W, YER150W, YIL087C, YLR251W, YJR148W, YML100W, YBR230C, YJL088W, YLR438W, YOR074C, YLR380W, YMR084W, YER038C, YGR008C, YIR035C, YLR343W, YLR375W, YOR324C, YDR346C, YIL059C, YNR038W, YPL087W, YOL058W, YGR138C, YGR139W, YKL120W, YDL048C, YOR361C, YOR302W, YHR219W, YLL012W, YLR387C, YNL160W, YOL119C, YOL123W, YOR303W, YER067W, YER069W, YGL090W, YJL166W, YBR054W, YJR046W, YLR297W, YCR031C, YDR055W, YMR001C, YMR034C, YEL037C, YGR173W, YHR135C, YHR137W, YJL076W, YLR049C, YLR452C, YLR427W, YMR181C, YMR211W, YMR250W, YOR026W, YJR135W-A, YLL026W, YPR044C, YLR178C, YLR395C, YDL183C, YML081C-A, YOR150W
Genes supported by both experiments 7 genes
YDR279W, YER069W, YJL088W, YOL058W, YOL140W, YOR302W, YOR303W
Predicted TF–TF partners 3 genes
BAS1, GCN4, RSF2